docker_action:0.0 #98
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# This is a basic workflow to help you get started with Actions | |
name: docker_action:0.0 | |
on: | |
push: | |
branches: | |
- 'master' | |
workflow_dispatch: | |
schedule: | |
# * is a special character in YAML so you have to quote this string : weekly,Sunday,11:00 #m h d/m m d/w | |
- cron: '00 12 * * 0' | |
jobs: | |
docker-run-action: | |
runs-on: ubuntu-latest | |
container: | |
image: tamboraorg/crecoding:2020.0 | |
env: | |
NODE_ENV: development | |
ports: | |
- 80 | |
volumes: | |
- ${{ github.workspace }}:/cre/R | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set ownership | |
run: | | |
# this is to fix GIT not liking owner of the checkout dir | |
chown -R $(id -u):$(id -g) $PWD | |
# with: | |
# ref: master | |
## - name: Install liblapack-dev gfortran | |
## run: (apt-get -y --no-install-recommends install liblapack-dev gfortran) | |
## - name: Install RcppArmadillo | |
## run: (R -e "install.packages('RcppArmadillo')") | |
## - name: Install Lmoments | |
## run: (R -e "install.packages('Lmoments')") | |
## - name: Install lmomco | |
## run: (R -e "install.packages('lmomco')") | |
- name: Install qdapTools | |
run: (R -e "install.packages('qdapTools')") | |
- name: Run knitr | |
run: (R -e "rmarkdown::render('/cre/R/README.Rmd')") | |
- name: Run knitr P/T | |
run: (R -e "rmarkdown::render('/cre/R/PI_and_TI.Rmd')") | |
- name: Run knitr P | |
run: (R -e "rmarkdown::render('/cre/R/PI_only.Rmd')") | |
- name: Submit changes | |
uses: EndBug/add-and-commit@v9 |