Propagate input annotations to primary.cwlprov files #1881

Job	Run time
No leftovers	4m 34s
cwltool release test	26m 6s
CWL conformance (v1.0, docker)	4m 12s
build_test_container	5m 36s
CWL conformance (v1.0, singularity)	4m 21s
CWL conformance (v1.0, podman)	4m 14s
Tox (3, 8, lint)	36s
Linters (lintreadme)	1m 4s
CWL conformance (v1.1, docker)	7m 47s
Test on macos-latest	8m 15s
Tox (3, 8, unit)	7m 11s
Linters (shellcheck)	11s
CWL conformance (v1.1, singularity)	7m 58s
Tox (3, 8, bandit)	26s
Linters (pydocstyle)	14s
CWL conformance (v1.1, podman)	7m 57s
Tox (3, 8, mypy)	10m 0s
CWL conformance (v1.2, docker)	7m 48s
Tox (3, 9, lint)	26s
CWL conformance (v1.2, singularity)	7m 57s
Tox (3, 9, unit)	9m 57s
CWL conformance (v1.2, podman)	8m 3s
CWL conformance (v1.2, docker, --fast-parser)	7m 41s
Tox (3, 9, bandit)	41s
Tox (3, 9, mypy)	11m 36s
Tox (3, 10, lint)	56s
Tox (3, 10, unit)	7m 17s
Tox (3, 10, bandit)	28s
Tox (3, 10, mypy)	8m 32s
Tox (3, 11, lint)	41s
Tox (3, 11, unit)	7m 57s
Tox (3, 11, bandit)	25s
Tox (3, 11, mypy)	7m 38s
Tox (3, 12, lint)	28s
Tox (3, 12, unit)	9m 22s
Tox (3, 12, bandit)	29s
Tox (3, 12, mypy)	10m 35s
	3h 29m 39s

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