Where is the removeclipping tool?

[wynstep]

Hello,
did you add also the possibility to remove the clipped reads from the BAM file?

Thanks

[mbreese]

Not all of the functions in the original python ngsutils was ported over to the Java version. Is this a feature that you're missing? -- Marcus Breese

…

On Fri, Aug 16, 2019 at 7:29 PM Stefano Pirrò ***@***.***> wrote: Hello, did you add also the possibility to remove the clipped reads from the BAM file? Thanks — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#4?email_source=notifications&email_token=AAAYFI53BCZTWUUBZ4BLUQ3QE4Z4BA5CNFSM4IMNQCZ2YY3PNVWWK3TUL52HS4DFUVEXG43VMWVGG33NNVSW45C7NFSM4HFX7HDQ>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAAYFIY6KEAPWLKVSUNLZ3LQE4Z4BANCNFSM4IMNQCZQ> .

[wynstep]

For the purpose of my research project I would say "yes", this is a feature I am missing.
Could it be possible to perform the porting of this feature, please?

[mbreese]

This feature has been ported over. See the new release for a downloadable version!