Fix links in pycontrails-bada install #1009
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| # Run notebook documentation tests from the ground up | |
| name: Doc / Notebook tests | |
| on: | |
| # run on push to main | |
| push: | |
| branches: | |
| - main | |
| # run on all PRs | |
| pull_request: | |
| # Allows run manually from the Actions tab | |
| workflow_dispatch: | |
| # Run if a release is published | |
| workflow_call: | |
| # Global variables | |
| env: | |
| PYCONTRAILS_CACHE_DIR: '${{ github.workspace }}/.doc-test-cache' | |
| # disable all permissions at the top level | |
| # https://docs.github.com/en/actions/using-jobs/assigning-permissions-to-jobs | |
| permissions: {} | |
| # This allows a subsequently queued workflow run to interrupt previous runs | |
| concurrency: | |
| group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}' | |
| cancel-in-progress: true | |
| jobs: | |
| doc-test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.13' | |
| cache: pip | |
| cache-dependency-path: pyproject.toml | |
| - name: Authenticate to Google Cloud | |
| uses: google-github-actions/auth@v2 | |
| with: | |
| credentials_json: ${{ secrets.GCP_SERVICE_ACCOUNT }} | |
| - name: Set up Cloud SDK | |
| uses: google-github-actions/setup-gcloud@v2 | |
| # put bada files in the default location | |
| - name: BADA files | |
| run: | | |
| mkdir ../bada | |
| gcloud storage cp -r gs://contrails-301217-bada/bada/bada3 ${{ github.workspace }}/../bada/ | |
| gcloud storage cp -r gs://contrails-301217-bada/bada/bada4 ${{ github.workspace }}/../bada/ | |
| # download ERA5 data from pre-cached data on GCP | |
| - name: pycontrails cache (ERA5 data) | |
| run: | | |
| mkdir -p ${{ env.PYCONTRAILS_CACHE_DIR }} | |
| gcloud storage cp -r gs://contrails-301217-unit-test/doc-test-cache/* ${{ env.PYCONTRAILS_CACHE_DIR }}/ | |
| - name: Install pycontrails (dev) | |
| run: make dev-install | |
| # https://cloud.google.com/artifact-registry/docs/python/authentication | |
| - name: Install pycontrails-bada | |
| run: | | |
| pip install keyring keyrings.google-artifactregistry-auth | |
| pip install -U -i https://us-central1-python.pkg.dev/contrails-301217/pycontrails/simple pycontrails-bada | |
| - name: Test notebooks | |
| run: make nb-test | |
| # The doctests require numpy 2.0 or higher | |
| - name: Test docstrings | |
| run: | | |
| pip install "numpy>=2.0" | |
| make doctest |