Workflow Testing RO-Crate

rocrate_validator/profiles/workflow-testing-ro-crate/must/1_test_suite.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix ro: <./> .
+@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
+@prefix workflow-testing-ro-crate: <https://github.com/crs4/rocrate-validator/profiles/workflow-testing-ro-crate/> .
+@prefix schema: <http://schema.org/> .
+@prefix bioschemas: <https://bioschemas.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix wftest: <https://w3id.org/ro/terms/test#> .
+
+workflow-testing-ro-crate:WTROCTestSuiteRequired a sh:NodeShape ;
+    sh:name "Workflow Testing RO-Crate TestSuite MUST" ;
+    sh:description "Required properties of the Workflow Testing RO-Crate TestSuite" ;
+    sh:targetClass wftest:TestSuite ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestSuite MUST be referenced via mentions from root" ;
+        sh:description "The TestSuite MUST be referenced from the Root Data Entity via mentions" ;
+        sh:path [ sh:inversePath schema:mentions ] ;
+        sh:node ro-crate:RootDataEntity ;
+        sh:minCount 1 ;
+        sh:message "The TestSuite MUST be referenced from the Root Data Entity via mentions" ;
+    ] .
+
+
+workflow-testing-ro-crate:WTROCTestSuiteInstanceOrDefinition a sh:NodeShape ;
+    sh:name "TestSuite instance or definition" ;
+    sh:description "The TestSuite MUST refer to a TestInstance or TestDefinition" ;
+    sh:message "The TestSuite MUST refer to a TestInstance or TestDefinition" ;
+    sh:targetClass wftest:TestSuite ;
+    sh:or (
+        [ sh:property [
+            a sh:PropertyShape ;
+            sh:path wftest:instance ;
+            sh:class wftest:TestInstance ;
+            sh:minCount 1 ;
+        ]]
+        [ sh:property [
+            a sh:PropertyShape ;
+            sh:path wftest:definition ;
+            sh:class wftest:TestDefinition ;
+            sh:minCount 1 ;
+        ]]
+    ) .

rocrate_validator/profiles/workflow-testing-ro-crate/must/2_root_data_entity_metadata.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix ro: <./> .
+@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
+@prefix schema: <http://schema.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix wftest: <https://w3id.org/ro/terms/test#> .
+@prefix workflow-testing-ro-crate: <https://github.com/crs4/rocrate-validator/profiles/workflow-testing-ro-crate/> .
+
+workflow-testing-ro-crate:WTROCRootDataEntityMetadata a sh:NodeShape ;
+    sh:name "Root Data Entity Metadata" ;
+    sh:description "Properties of the Root Data Entity" ;
+    sh:targetClass ro-crate:RootDataEntity ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "Root Data Entity mentions" ;
+        sh:description "The Root Data Entity MUST refer to one or more test suites via mentions" ;
+        sh:path schema:mentions ;
+        sh:class wftest:TestSuite;
+        sh:minCount 1 ;
+        sh:message "The Root Data Entity MUST refer to one or more test suites via mentions" ;
+    ] .

rocrate_validator/profiles/workflow-testing-ro-crate/must/2_test_instance.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix ro: <./> .
+@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+@prefix workflow-testing-ro-crate: <https://github.com/crs4/rocrate-validator/profiles/workflow-testing-ro-crate/> .
+@prefix schema: <http://schema.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix wroc: <https://w3id.org/workflowhub/workflow-ro-crate#> .
+@prefix wftest: <https://w3id.org/ro/terms/test#> .
+
+workflow-testing-ro-crate:WTROCTestInstanceRequired a sh:NodeShape ;
+    sh:name "Workflow Testing RO-Crate TestInstance MUST" ;
+    sh:description "Required properties of the Workflow Testing RO-Crate TestInstance" ;
+    sh:targetClass wftest:TestInstance ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestInstance runsOn" ;
+        sh:description "The TestInstance MUST refer to a TestService via runsOn" ;
+        sh:path wftest:runsOn ;
+        sh:class wftest:TestService ;
+        sh:or (
+            [ sh:hasValue wftest:GithubService ; ]
+            [ sh:hasValue wftest:TravisService ; ]
+            [ sh:hasValue wftest:JenkinsService ; ]
+        ) ;
+        sh:minCount 1 ;
+        sh:message "The TestInstance MUST refer to a TestService via runsOn" ;
+    ] ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestInstance url" ;
+        sh:description "The TestInstance MUST refer to the test service base URL via url" ;
+        sh:path schema:url ;
+        sh:datatype xsd:string ;
+        sh:pattern "^http.*" ;
+        sh:minCount 1 ;
+        sh:message "The TestInstance MUST refer to the test service base URL via url" ;
+    ] ; sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestInstance resource" ;
+        sh:description "The TestInstance MUST refer to the relative URL of the test project via resource" ;
+        sh:path wftest:resource ;
+        sh:datatype xsd:string ;
+        sh:minCount 1 ;
+        sh:message "The TestInstance MUST refer to the relative URL of the test project via resource" ;
+    ] .

rocrate_validator/profiles/workflow-testing-ro-crate/must/3_test_definition.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix ro: <./> .
+@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
+@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+@prefix dct: <http://purl.org/dc/terms/> .
+@prefix workflow-testing-ro-crate: <https://github.com/crs4/rocrate-validator/profiles/workflow-testing-ro-crate/> .
+@prefix schema: <http://schema.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix wroc: <https://w3id.org/workflowhub/workflow-ro-crate#> .
+@prefix wftest: <https://w3id.org/ro/terms/test#> .
+
+workflow-testing-ro-crate:WTROCTestDefinitionRequired a sh:NodeShape ;
+    sh:name "Workflow Testing RO-Crate TestDefinition MUST" ;
+    sh:description "Required properties of the Workflow Testing RO-Crate TestDefinition" ;
+    sh:targetClass wftest:TestDefinition ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestDefinition type" ;
+        sh:description "The TestDefinition MUST have types TestDefinition and File" ;
+        sh:path rdf:type ;
+        sh:hasValue schema:MediaObject, wftest:TestDefinition ;
+        sh:minCount 1 ;
+        sh:message "The TestDefinition MUST have types TestDefinition and File" ;
+    ] ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestDefinition conformsTo" ;
+        sh:description "The TestDefinition MUST refer to the test engine it is written for via conformsTo" ;
+        sh:path dct:conformsTo ;
+        sh:class schema:SoftwareApplication ;
+        sh:minCount 1 ;
+        sh:message "The TestDefinition MUST refer to the test engine it is written for via conformsTo" ;
+    ] ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestDefinition engineVersion" ;
+        sh:description "The TestDefinition MUST refer to the test engine version via engineVersion" ;
+        sh:path wftest:engineVersion ;
+        sh:datatype xsd:string ;
+        sh:minCount 1 ;
+        sh:message "The TestDefinition MUST refer to the test engine version via engineVersion" ;
+    ] .

rocrate_validator/profiles/workflow-testing-ro-crate/profile.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix dct: <http://purl.org/dc/terms/> .
+@prefix prof: <http://www.w3.org/ns/dx/prof/> .
+@prefix role: <http://www.w3.org/ns/dx/prof/role/> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+
+<https://w3id.org/ro/wftest/0.1>
+    a prof:Profile ;
+
+    # the Profile's label
+    rdfs:label "Workflow Testing RO-Crate 0.1" ;
+
+    # regular metadata, a basic description of the Profile
+    rdfs:comment """Workflow Testing RO-Crate Metadata Specification 0.1"""@en ;
+
+    # URI of the publisher of the Specification
+    dct:publisher <https://w3id.org/ro/wftest> ;
+
+    # This profile is an extension of Workflow RO-Crate
+    prof:isProfileOf <https://w3id.org/workflowhub/workflow-ro-crate/1.0> ;
+
+    # This profile is a transitive profile of Workflow RO-Crate and the RO-Crate Metadata Specification
+    prof:isTransitiveProfileOf <https://w3id.org/ro/crate/1.1> ,
+                               <https://w3id.org/workflowhub/workflow-ro-crate/1.0> ;
+
+    # this profile has a JSON-LD context resource
+    prof:hasResource [
+        a prof:ResourceDescriptor ;
+
+        # it's in JSON-LD format
+        dct:format <https://w3id.org/mediatype/application/ld+json> ;
+
+        # it conforms to JSON-LD, here refered to by its namespace URI as a Profile
+        dct:conformsTo <https://www.w3.org/TR/json-ld11/> ;
+
+        # this profile resource plays the role of "Vocabulary"
+        # described in this ontology's accompanying Roles vocabulary
+        prof:hasRole role:Vocabulary ;
+
+        # this profile resource's actual file
+        prof:hasArtifact <https://w3id.org/ro/crate/1.1/context> ;
+    ] ;
+
+    # this profile has a human-readable documentation resource
+    prof:hasResource [
+        a prof:ResourceDescriptor ;
+
+        # it's in HTML format
+        dct:format <https://w3id.org/mediatype/text/html> ;
+
+        # it conforms to HTML, here refered to by its namespace URI as a Profile
+        dct:conformsTo <https://www.w3.org/TR/html/> ;
+
+        # this profile resource plays the role of "Specification"
+        # described in this ontology's accompanying Roles vocabulary
+        prof:hasRole role:Specification ;
+
+        # this profile resource's actual file
+        prof:hasArtifact <https://crs4.github.io/workflow-testing-ro-crate/0.1/> ;
+
+        # this profile is inherited from Workflow RO-Crate
+        prof:isInheritedFrom <https://w3id.org/workflowhub/workflow-ro-crate/1.0> ;
+    ] ;
+
+    # a short code to refer to the Profile with when a URI can't be used
+    prof:hasToken "workflow-testing-ro-crate" ;
+.

rocrate_validator/profiles/workflow-testing-ro-crate/should/1_test_suite.ttl

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+# Copyright (c) 2024 CRS4
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+@prefix ro: <./> .
+@prefix ro-crate: <https://github.com/crs4/rocrate-validator/profiles/ro-crate/> .
+@prefix workflow-testing-ro-crate: <https://github.com/crs4/rocrate-validator/profiles/workflow-testing-ro-crate/> .
+@prefix schema: <http://schema.org/> .
+@prefix bioschemas: <https://bioschemas.org/> .
+@prefix sh: <http://www.w3.org/ns/shacl#> .
+@prefix wroc: <https://w3id.org/workflowhub/workflow-ro-crate#> .
+@prefix wftest: <https://w3id.org/ro/terms/test#> .
+
+workflow-testing-ro-crate:WTROCTestSuiteRecommended a sh:NodeShape ;
+    sh:name "Workflow Testing RO-Crate TestSuite SHOULD" ;
+    sh:description "Recommended properties of the Workflow Testing RO-Crate TestSuite" ;
+    sh:targetClass wftest:TestSuite ;
+    sh:property [
+        a sh:PropertyShape ;
+        sh:name "TestSuite mainEntity" ;
+        sh:description "The TestSuite SHOULD refer to the tested workflow via mainEntity" ;
+        sh:path schema:mainEntity ;
+        sh:class schema:MediaObject ,
+                 schema:SoftwareSourceCode ,
+                 bioschemas:ComputationalWorkflow ;
+        sh:minCount 1 ;
+        sh:message "The TestSuite SHOULD refer to the tested workflow via mainEntity" ;
+    ] .