fix test DL2 and IRF paths (#495) #2308
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| name: CI | |
| on: [push, pull_request] | |
| env: | |
| PYTEST_ADDOPTS: --color=yes | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| # lstchain dependency | |
| python-version: ['3.9', '3.10', '3.11'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| env: | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| run: | | |
| . $CONDA/etc/profile.d/conda.sh | |
| conda config --set always_yes yes --set changeps1 no | |
| sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml | |
| echo "Creating conda env" | |
| conda env create -n ci -f environment.yml | |
| conda activate ci | |
| echo "Installing additional pip packages" | |
| pip install \ | |
| pytest-cov \ | |
| pyflakes | |
| echo "pip install ." | |
| pip install . | |
| - name: Static codechecks | |
| run: | | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda activate ci | |
| pyflakes lstmcpipe | |
| - name: Download test data | |
| env: | |
| TEST_DATA_USER: ${{ secrets.TEST_DATA_USER }} | |
| TEST_DATA_PASSWORD: ${{ secrets.TEST_DATA_PASSWORD }} | |
| run: | | |
| ./download_test_data.sh | |
| - name: Tests | |
| run: | | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda activate ci | |
| pytest --cov=lstmcpipe --cov-report=xml lstmcpipe | |
| - uses: codecov/codecov-action@v4 | |
| - name: Detect added configs | |
| uses: tj-actions/changed-files@v41 | |
| id: verify-changed-files | |
| with: | |
| files: | | |
| production_configs/*/*.yml | |
| production_configs/*/*.yaml | |
| # production_configs/*/*.json | |
| # TODO: solve issue in github actions extracting sublist of yaml files, see below | |
| - name: Validate added configs. | |
| if: steps.verify-changed-files.outputs.any_changed == 'true' | |
| run: | | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda activate ci | |
| export filelist="${{ steps.verify-changed-files.outputs.all_changed_files }}" | |
| # export filelist=`grep -P '\.yaml$|\.yml$' <<< ${filelist[*]}` | |
| # the above line works on ubuntu but fails on github action, not following the given pattern | |
| echo "Added yaml files: $filelist" | |
| for file in $filelist; do | |
| echo "Checking $file"; | |
| echo "lstmcpipe_validate_config $file -lc `dirname $file`/*lstchain*.json" | |
| lstmcpipe_validate_config $file -lc `dirname $file`/*lstchain*.json ; | |
| echo "Valid!"; | |
| done |