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Fixed ga4gh-beacon#140
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@datsirul
datsirul committed Jul 16, 2024
1 parent ae4214a commit dd18509
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Showing 14 changed files with 109 additions and 59 deletions.
12 changes: 7 additions & 5 deletions models/json/beacon-v2-default-model/analyses/endpoints.json
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Expand Up @@ -10,14 +10,16 @@
}
},
"filters": {
"examples": {
"example1": {
"value": [
"variantcaller:GATK4.0"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"variantcaller:GATK4.0"
]
],
"items": {
"type": "string"
},
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26 changes: 17 additions & 9 deletions models/json/beacon-v2-default-model/biosamples/endpoints.json
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Expand Up @@ -10,18 +10,26 @@
}
},
"filters": {
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"examples": {
"example1": {
"value": [
"NCIT:C3222"
],
[
"OBI:0100058",
]
},
"example2": {
"value": [
"NCIT:C4813"
]
],
},
"example3": {
"value": [
"OBI:0100058"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"items": {
"type": "string"
},
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12 changes: 7 additions & 5 deletions models/json/beacon-v2-default-model/cohorts/endpoints.json
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Expand Up @@ -10,14 +10,16 @@
}
},
"filters": {
"examples": {
"example1": {
"value": [
"OMIABIS:0001017"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"OMIABIS:0001017"
]
],
"items": {
"type": "string"
},
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10 changes: 7 additions & 3 deletions models/json/beacon-v2-default-model/datasets/endpoints.json
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Expand Up @@ -10,12 +10,16 @@
}
},
"filters": {
"examples": {
"example1": {
"value": [
"DUO:0000007"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"examples": [
"DUO:0000007"
],
"items": {
"type": "string"
},
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26 changes: 17 additions & 9 deletions models/json/beacon-v2-default-model/genomicVariations/endpoints.json
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Expand Up @@ -46,18 +46,26 @@
}
},
"filters": {
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"examples": {
"example1": {
"value": [
"EFO:0009655"
],
[
"NCIT:C48725",
]
},
"example2": {
"value": [
"NCIT:C48725"
]
},
"example3": {
"value": [
"NCIT:C28080"
]
],
}
},
"in": "query",
"name": "filters",
"schema": {
"items": {
"type": "string"
},
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12 changes: 7 additions & 5 deletions models/json/beacon-v2-default-model/individuals/endpoints.json
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Expand Up @@ -10,14 +10,16 @@
}
},
"filters": {
"examples": {
"example1": {
"value": [
"NCIT:C20197"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"NCIT:C20197"
]
],
"items": {
"type": "string"
},
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12 changes: 7 additions & 5 deletions models/json/beacon-v2-default-model/runs/endpoints.json
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Expand Up @@ -18,14 +18,16 @@
}
},
"filters": {
"examples": {
"example1": {
"value": [
"OBI:0002048"
]
}
},
"in": "query",
"name": "filters",
"schema": {
"examples": [
[
"OBI:0002048"
]
],
"items": {
"type": "string"
},
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6 changes: 4 additions & 2 deletions models/src/beacon-v2-default-model/analyses/endpoints.yaml
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Expand Up @@ -164,5 +164,7 @@ components:
type: array
items:
type: string
examples:
- - variantcaller:GATK4.0
examples:
example1:
value:
- variantcaller:GATK4.0
14 changes: 10 additions & 4 deletions models/src/beacon-v2-default-model/biosamples/endpoints.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -240,7 +240,13 @@ components:
type: array
items:
type: string
examples:
- - NCIT:C3222
- - OBI:0100058
- NCIT:C4813
examples:
example1:
value:
- NCIT:C3222
example2:
value:
- NCIT:C4813
example3:
value:
- OBI:0100058
6 changes: 4 additions & 2 deletions models/src/beacon-v2-default-model/cohorts/endpoints.yaml
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Expand Up @@ -215,5 +215,7 @@ components:
type: array
items:
type: string
examples:
- - OMIABIS:0001017
examples:
example1:
value:
- OMIABIS:0001017
6 changes: 4 additions & 2 deletions models/src/beacon-v2-default-model/datasets/endpoints.yaml
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Expand Up @@ -289,5 +289,7 @@ components:
type: array
items:
type: string
examples:
- DUO:0000007
examples:
example1:
value:
- DUO:0000007
14 changes: 10 additions & 4 deletions models/src/beacon-v2-default-model/genomicVariations/endpoints.yaml
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Expand Up @@ -282,7 +282,13 @@ components:
type: array
items:
type: string
examples:
- - EFO:0009655
- - NCIT:C48725
- NCIT:C28080
examples:
example1:
value:
- EFO:0009655
example2:
value:
- NCIT:C48725
example3:
value:
- NCIT:C28080
6 changes: 4 additions & 2 deletions models/src/beacon-v2-default-model/individuals/endpoints.yaml
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Expand Up @@ -235,5 +235,7 @@ components:
type: array
items:
type: string
examples:
- - NCIT:C20197
examples:
example1:
value:
- NCIT:C20197
6 changes: 4 additions & 2 deletions models/src/beacon-v2-default-model/runs/endpoints.yaml
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Expand Up @@ -208,5 +208,7 @@ components:
type: array
items:
type: string
examples:
- - OBI:0002048
examples:
example1:
value:
- OBI:0002048

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