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  1. CAFEx CAFEx Public

    Filter samples in VCF based on genotype metrics

    Python

  2. vase vase Public

    Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.

    Python 10 2

  3. autoprimer3 autoprimer3 Public

    A program to automatically generate primer designs to genes and genomic coordinates using primer3

    HTML 8 3

  4. MutationMapper MutationMapper Public

    Predict functional consequences of mutations identified from sanger sequencing.

    Java 3 1

  5. ReVERSe ReVERSe Public

    Rare Variant Enrichment and Recessive Segregation

    Python

  6. perturbseq_workflow perturbseq_workflow Public

    Snakemake workflow for generating read count data from CRISPR screens.

    Jupyter Notebook