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1. OrthoFinder OrthoFinder Public

   Phylogenetic orthology inference for comparative genomics

   Python 728 188

2. STAG STAG Public

   STAG: Species Tree from All Genes

   Python 31 6

3. SHOOT SHOOT Public

   SHOOT.bio - the phylogenetic search engine

   Python 24 4

4. STRIDE STRIDE Public

   STRIDE: Species Tree Root Inference from Gene Duplication Events

   Python 11 7

5. davidemms.github.io davidemms.github.io Public

   OrthoFinder Tutorials

   CSS 2

6. shoot_webserver shoot_webserver Public

   JavaScript 3