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References

ddarriba edited this page Nov 16, 2016 · 3 revisions
  • Felsenstein, J. (1981). Evolutionary trees from dna sequences: A maximum likelihood approach. Journal of Molecular Evolution, 17, 368–376.
  • Hasegawa, M., Kishino, K., and Yano, T. (1985). Dating the human-ape splitting by a molecular clock of mitochondrial dna. Journal of Molecular Evolution, 22, 160–174.
  • Jukes, T. and Cantor, C. (1969). Evolution of protein molecules. Academic Press, New York, NY, pages 21–132.
  • Kimura, M. (1980). A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16, 111–120.
  • Kimura, M. (1981). Estimation of evolutionary distances between homologous nucleotide sequences. Proceedings of the National Academy of Sciences, U.S.A, 78, 454–458.
  • Posada, D. (2003). Using modeltest and paup to select a model of nucleotide substitution. pages 6.5.1–6.5.14.
  • Posada, D. and Buckley, T. (2004). Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests. Systematic Biology, 53, 793–808.
  • Posada, D. and Crandall, K. (2001). Selecting the best-fit model of nucleotide substitution. Systematic Biology, 50, 580–601.
  • Tamura, K. and Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial dna in humans and chimpanzees. Molecular Biology and Evolution, 10, 512–526.
  • Tavaré, S. (1986). Some probabilistic and statistical problems in the analysis of dna sequences. Some mathematical questions in biology - DNA sequence analysis. Amer. Math. Soc., Providence, RI, pages 57–86.
  • Zharkikh, A. (1994). Estimation of evolutionary distances between nucleotide sequences. Journal of Molecular Evolution, 39, 315–329.
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