gtsummary 1.6.1

New Functionality

• Added the standard error of proportions to the list of available statistics for categorical data summaries in tbl_svysummary(). (#1187)

• Added Tarone-Ware test to add_p.tbl_survfit() (#732)

• Updated add_global_p() to handle tbl_uvregression() objects where users specified the x= argument (when y= argument is more common). (#1260)

Other Updates

• Updated start-up messaging. (#1228)

• The paired.wilcox.test available in add_p.tbl_summary() and add_difference.tbl_summary() was mistakenly marked as returning a difference, but it does not. The documentation has been corrected, which results in improved messaging to the user when the test is selected in add_difference(). (#1279)

• Improved error messages for paired tests in add_p() and add_difference() when group= argument is not specified. (#1273)

• Added argument with_gtsummary_theme(msg_ignored_elements=) argument. Use this argument to message users if any theme elements will be overwritten and therefore ignored inside the with_gtsummary_theme() call. (#1266)

• Swapped gt::fmt_missing() for gt::sub_missing() as the former is now deprecated. (#1257)

• The checks for "haven_labelled" class are now only performed for the variables indicated in include= and by= in tbl_summary() and tbl_svysummary(). The checks in tbl_uvregression() and tbl_survfit.data.frame() are only applied to the variables in include=, e.g. no checking for the outcome variable(s).

• Updates to labels and default formatting functions of unweighted statistics presented in tbl_svysummary(). (#1253)

• Adding additional structural checks in tbl_merge() and inline_text() to provide better error messaging. (#1248)

• Added tbl_regression.crr() method with messaging recommending use of tidycmprsk::crr() instead. (#1237)

• The experimental support for ftExtra::colformat_md() in as_flex_table() has been removed. The function requires evaluated YAML paths and does not allow un-evaluated references like bibliography:: "`r here::here()`". (#1229)

• Update for tbl_summary(by=) that now allows for a column named "variable" to be passed. (#1234)

• Added theme element to control what missing statistic is shown in summary tables with options to display number or percent missing or non-missing or total number of observations. (#1224)

• Renamed modify_cols_merge() to modify_column_merge() to be inline with the other modify_column_*() functions.

Bug Fixes

• Fix in as_kable_extra() when output format is 'latex' where a cell that had been bold or italicized had special characters double-escaped. Added a condition not to escape special characters in these styled cells. (#1230)

• Fix in with_gtsummary_theme(). The function restored any previously set theme, but inadvertently included the temporary theme along with it.