Refactor: rewrite module neighbour to parition atom into boxes #10206

Job	Run time
Build with GNU toolchain	8m 25s
Build with Intel toolchain	7m 17s
Build extra components with GNU toolchain	16m 49s
Build extra components with Intel toolchain	12m 27s
Build with CUDA support	16m 40s
Build without LCAO	5m 15s
Build without ELPA	8m 25s
Build without MPI	6m 28s
Build without LCAO and MPI	3m 56s
	1h 25m 42s

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