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docs: improve docs for environment variables #4070

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merged 4 commits into from
Aug 21, 2024

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@njzjz njzjz commented Aug 20, 2024

Summary by CodeRabbit

  • New Features

    • Introduced comprehensive documentation on runtime environment variables for improved user guidance.
    • Added references to environment-related topics in various interface documentation.
  • Documentation

    • Enhanced structure and clarity of documentation regarding environment variables across multiple sections.
    • Improved presentation of environment variables for better readability.
    • Included detailed descriptions and choices for configuring performance-related variables.
  • Bug Fixes

    • Corrected terminology from "environmental variables" to "environment variables" for consistency.

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
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coderabbitai bot commented Aug 20, 2024

Walkthrough

Walkthrough

The recent changes enhance the DeePMD-kit package documentation by introducing detailed sections on runtime environment variables. These updates provide comprehensive descriptions, default values, and a structured format, improving user understanding and usability. Additionally, consistent terminology and formatting adjustments throughout various documents clarify the configurations necessary for optimal performance.

Changes

Files Change Summary
doc/env.md, doc/index.rst, doc/install/install-from-source.md Introduced comprehensive sections on runtime environment variables with detailed descriptions and structured formatting, improving usability and clarity. Added env to index.
doc/inference/cxx.md, doc/inference/nodejs.md, doc/inference/python.md, doc/third-party/... Added notes about runtime environment variables to enhance user awareness in various interface and third-party documentation.
doc/train/training-advanced.md Removed a table listing environment variables and redirected users to a dedicated "Runtime environment variables" document for streamlined reference.
doc/troubleshooting/howtoset_num_nodes.md Corrected terminology from "environmental variables" to "environment variables" and improved formatting for clarity.

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Actionable comments posted: 1

Outside diff range, codebase verification and nitpick comments (1)
doc/env.md (1)

29-31: Reword repetitive sentence beginnings.

The sentences starting with "If" in the list are repetitive. Consider rephrasing for variety and improved readability.

Here's a suggestion:

- If OpenMP is used, [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html) can be used to control OpenMP threads, such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
- If CUDA is used, [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables) can be used to control CUDA devices, such as `CUDA_VISIBLE_DEVICES`.
- If ROCm is used, [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables) can be used to control ROCm devices.
+ OpenMP users can control threads using [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html), such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
+ For CUDA, [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables) manage CUDA devices, like `CUDA_VISIBLE_DEVICES`.
+ ROCm users can utilize [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables) for device control.
Tools
LanguageTool

[style] ~31-~31: Three successive sentences begin with the same word. Consider rewording the sentence or use a thesaurus to find a synonym.
Context: ...ices, such as CUDA_VISIBLE_DEVICES. - If ROCm is used, [ROCm environment variabl...

(ENGLISH_WORD_REPEAT_BEGINNING_RULE)

doc/troubleshooting/howtoset_num_nodes.md Outdated Show resolved Hide resolved
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codecov bot commented Aug 20, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 82.94%. Comparing base (d77c075) to head (3215fb2).
Report is 175 commits behind head on devel.

Additional details and impacted files
@@            Coverage Diff             @@
##            devel    #4070      +/-   ##
==========================================
- Coverage   82.95%   82.94%   -0.01%     
==========================================
  Files         522      522              
  Lines       51044    51045       +1     
  Branches     3031     3028       -3     
==========================================
- Hits        42341    42340       -1     
  Misses       7759     7759              
- Partials      944      946       +2     

☔ View full report in Codecov by Sentry.
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Actionable comments posted: 0

Outside diff range, codebase verification and nitpick comments (1)
doc/env.md (1)

29-31: Improve sentence variety for better readability.

The section has repetitive sentence beginnings. Consider rewording for improved readability.

Here's a suggested rewording:

- If OpenMP is used, [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html) can be used to control OpenMP threads, such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
- If CUDA is used, [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables) can be used to control CUDA devices, such as `CUDA_VISIBLE_DEVICES`.
- If ROCm is used, [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables) can be used to control ROCm devices.
+ When using OpenMP, [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html) control threads, such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
+ For CUDA, [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables) manage device settings, such as `CUDA_VISIBLE_DEVICES`.
+ With ROCm, [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables) handle device configurations.
Tools
LanguageTool

[style] ~31-~31: Three successive sentences begin with the same word. Consider rewording the sentence or use a thesaurus to find a synonym.
Context: ...ices, such as CUDA_VISIBLE_DEVICES. - If ROCm is used, [ROCm environment variabl...

(ENGLISH_WORD_REPEAT_BEGINNING_RULE)

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Actionable comments posted: 0

Outside diff range, codebase verification and nitpick comments (1)
doc/env.md (1)

29-33: Reword repetitive sentences for clarity.

The sentences starting with "If" can be rephrased to improve readability and avoid repetition.

Consider rewording as follows:

- If OpenMP is used, [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html) can be used to control OpenMP threads, such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
- If CUDA is used, [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables) can be used to control CUDA devices, such as `CUDA_VISIBLE_DEVICES`.
- If ROCm is used, [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables) can be used to control ROCm devices.
+ Use [OpenMP environment variables](https://www.openmp.org/spec-html/5.0/openmpch6.html) to control OpenMP threads, such as [`OMP_NUM_THREADS`](https://www.openmp.org/spec-html/5.0/openmpse50.html#x289-20540006.2).
+ Control CUDA devices with [CUDA environment variables](https://docs.nvidia.com/cuda/cuda-c-programming-guide/index.html#cuda-environment-variables), such as `CUDA_VISIBLE_DEVICES`.
+ Manage ROCm devices using [ROCm environment variables](https://rocm.docs.amd.com/en/latest/conceptual/gpu-isolation.html#environment-variables).
Tools
LanguageTool

[style] ~31-~31: Three successive sentences begin with the same word. Consider rewording the sentence or use a thesaurus to find a synonym.
Context: ...ices, such as CUDA_VISIBLE_DEVICES. - If ROCm is used, [ROCm environment variabl...

(ENGLISH_WORD_REPEAT_BEGINNING_RULE)

@njzjz njzjz marked this pull request as ready for review August 21, 2024 01:24
@wanghan-iapcm wanghan-iapcm added this pull request to the merge queue Aug 21, 2024
Merged via the queue into deepmodeling:devel with commit f6c1352 Aug 21, 2024
60 checks passed
mtaillefumier pushed a commit to mtaillefumier/deepmd-kit that referenced this pull request Sep 18, 2024
<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->
## Summary by CodeRabbit

- **New Features**
- Introduced comprehensive documentation on runtime environment
variables for improved user guidance.
- Added references to environment-related topics in various interface
documentation.

- **Documentation**
- Enhanced structure and clarity of documentation regarding environment
variables across multiple sections.
- Improved presentation of environment variables for better readability.
- Included detailed descriptions and choices for configuring
performance-related variables.

- **Bug Fixes**
- Corrected terminology from "environmental variables" to "environment
variables" for consistency.
<!-- end of auto-generated comment: release notes by coderabbit.ai -->

---------

Signed-off-by: Jinzhe Zeng <jinzhe.zeng@rutgers.edu>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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