v2.0.0

Release Notes:

In this version:

1. The pipeline now accepts fast5/pod5/bam files, offering multiple entry points tailored to each format.
2. It can process inputs provided as either a directory path containing multiple files or a single file path.
3. Guppy has been replaced by Dorado for basecalling and alignment.
4. For methylation calling, modbam2bed has been replaced with modkit.

v0.1.0

1st version. This version supports only fast5 as a starting entry for the pipeline