FIX tests

dieterich-lab · Jul 15, 2024 · 4c10291 · 4c10291
1 parent 066fcb8
commit 4c10291
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Showing 2 changed files with 10 additions and 2 deletions.
diff --git a/server/tests/conftest.py b/server/tests/conftest.py
@@ -55,15 +55,21 @@ def setup():
             name="N6-methyladenosine",
             short_name="m6A",
             moiety="nucleoside",
+            reference_id=96,
         ),
         Modomics(
             id="2000000005C",
             name="5-methylcytidine",
             short_name="m5C",
             moiety="nucleoside",
+            reference_id=18,
         ),
         Modomics(
-            id="2000000009U", name="pseudouridine", short_name="Y", moiety="nucleoside"
+            id="2000000009U",
+            name="pseudouridine",
+            short_name="Y",
+            moiety="nucleoside",
+            reference_id=118,
         ),
     ]
     add.extend(modomics)

diff --git a/server/tests/fixtures/dataset.py b/server/tests/fixtures/dataset.py
@@ -21,7 +21,9 @@
 def dataset(Session, setup):  # noqa
     stamp = datetime.now(timezone.utc).replace(microsecond=0)
     organism = Organism(id=1, taxa_id=9606, cto="Cell Type 1")
-    modomics = Modomics(id="m1", name="Mod1", short_name="Mod1", moiety="moiety")
+    modomics = Modomics(
+        id="m1", name="Mod1", short_name="Mod1", moiety="moiety", reference_id=1
+    )
     modification = Modification(id=1, modomics_id=modomics.id, rna="Bla")
     method = DetectionMethod(id="m1", cls="c1", meth="Method m1")
     technology = DetectionTechnology(id=1, method_id=method.id, tech="Very Cool Tech")