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15 Open 62 Closed
15 Open 62 Closed
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Issues list

Reenable samtools read count cross checks in HtsjdkReadsRddTest.testReadIntervals
#163 opened Jan 31, 2022 by cmnbroad
Migrate end-to-end tests from Travis CI to Github Actions
#160 opened Jan 26, 2022 by heuermh 0.4.0
1
1
Updating maven-failsafe-plugin to 3.0.0-M5 fails CI integration tests under openjdk11
#150 opened Jan 31, 2021 by heuermh 0.4.0
2
1
Updating google-cloud-nio dependency to 0.122.5 fails unit tests
#145 opened Jan 28, 2021 by heuermh 0.4.0
1
1
Split guessing fails with long reads bug Something isn't working
#126 opened Jan 27, 2020 by lbergelson
Read in parallel from NCBI Sequence Read Archive (SRA) format
#93 opened Mar 8, 2019 by heuermh
1
Considering other libraries for models, is Disq too tightly bound to htsjdk?
#87 opened Feb 18, 2019 by heuermh
2
Set up coveralls for unit test coverage
#83 opened Jan 28, 2019 by tomwhite
Add top-level and package javadoc
#62 opened Nov 5, 2018 by tomwhite
Investigate performance implications of using Java serialization for genotypes
#55 opened Oct 24, 2018 by heuermh
1
Create Github issue and pull request templates
#38 opened Sep 25, 2018 by heuermh
1
Consider to test with single in addition to multiple cores
#37 opened Sep 22, 2018 by magicDGS
Support for FASTQ
#31 opened Sep 10, 2018 by magicDGS
5
Remove sink provider creation logic from FileCardinalityWriteOption
#26 opened Sep 4, 2018 by tomwhite
Design public API for access from multiple languages (Java, Scala, Python, R)
#24 opened Aug 31, 2018 by heuermh
ProTip! Follow long discussions with comments:>50.