Skip to content

restore original location of API stubs #169

restore original location of API stubs

restore original location of API stubs #169

Workflow file for this run

name: 'Tests'
concurrency:
group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }}
cancel-in-progress: true
on: # yamllint disable-line rule:truthy
push:
branches:
- '*'
pull_request:
branches:
- '*'
permissions:
contents: read
jobs:
style:
name: Style
runs-on: ubuntu-latest
timeout-minutes: 3
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
python-version: '3.11'
- uses: psf/black@stable
- uses: pre-commit/action@v3.0.0
bandit:
name: Bandit
needs: style
runs-on: ubuntu-latest
steps:
- uses: davidslusser/actions_python_bandit@v1.0.0
with:
src: "mne"
options: "-c pyproject.toml -ll -r"
pip_install_command: "pip install bandit[toml]"
pytest:
name: '${{ matrix.os }} / ${{ matrix.kind }} / ${{ matrix.python }}'
needs: style
timeout-minutes: 70
continue-on-error: true
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -el {0}
env:
PYTHON_VERSION: '${{ matrix.python }}'
MKL_NUM_THREADS: '1'
OPENBLAS_NUM_THREADS: '1'
PYTHONUNBUFFERED: '1'
MNE_CI_KIND: '${{ matrix.kind }}'
CI_OS_NAME: '${{ matrix.os }}'
strategy:
matrix:
include:
- os: ubuntu-latest
python: '3.10'
kind: conda
- os: ubuntu-latest
python: '3.10'
kind: notebook
- os: ubuntu-latest
python: '3.11'
kind: pip-pre
- os: macos-latest
python: '3.8'
kind: mamba
- os: windows-latest
python: '3.10'
kind: mamba
- os: ubuntu-latest
python: '3.8'
kind: minimal
- os: ubuntu-20.04
python: '3.8'
kind: old
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- run: ./tools/github_actions_env_vars.sh
# Xvfb/OpenGL
- uses: pyvista/setup-headless-display-action@main
with:
qt: true
pyvista: false
if: matrix.kind != 'notebook'
# Python (if pip)
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
if: startswith(matrix.kind, 'pip')
# Python (if conda)
- uses: conda-incubator/setup-miniconda@v2
with:
python-version: ${{ env.PYTHON_VERSION }}
environment-file: ${{ env.CONDA_ENV }}
activate-environment: mne
miniforge-version: latest
miniforge-variant: Mambaforge
use-mamba: ${{ matrix.kind != 'conda' }}
if: ${{ !startswith(matrix.kind, 'pip') }}
- name: 'Install OSMesa VTK variant'
run: |
# TODO: As of 2023/02/28, notebook tests need a pinned mesalib
mamba install -c conda-forge "vtk>=9.2=*osmesa*" "vtk-base>=9.2=*osmesa*" "mesalib=23.1.4"
mamba list
if: matrix.kind == 'notebook'
- run: ./tools/github_actions_dependencies.sh
# Minimal commands on Linux (macOS stalls)
- run: ./tools/get_minimal_commands.sh
if: ${{ startswith(matrix.os, 'ubuntu') }}
- run: ./tools/github_actions_install.sh
- run: ./tools/github_actions_infos.sh
# Check Qt on non-notebook
- run: ./tools/check_qt_import.sh $MNE_QT_BACKEND
if: ${{ env.MNE_QT_BACKEND != '' }}
- name: Run tests with no testing data
run: MNE_SKIP_TESTING_DATASET_TESTS=true pytest -m "not (ultraslowtest or pgtest)" --tb=short --cov=mne --cov-report xml -vv -rfE mne/
if: matrix.kind == 'minimal'
- run: ./tools/get_testing_version.sh
- uses: actions/cache@v3
with:
key: ${{ env.TESTING_VERSION }}
path: ~/mne_data
- run: ./tools/github_actions_download.sh
- run: ./tools/github_actions_test.sh
- uses: codecov/codecov-action@v3
if: success()