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* Store change of sonar.login to sonar.token. * Hotfix to develop, updating aclocal.m4 and config.h.in to what is created when running bootstrap inside the dtcenter/met-base:v3.1 Docker image. Updates autoconf 2.69 output to 2.71. * Adding -lnetcdf to configure_lib_args for NetCDF-CXX compilation * Added eckit and atlas loads and paths * Added atlas and eckit loads and paths * Changing -j to "-j 5" as the recommended value * Update ensemble-stat.rst Fixed incorrect path to obs error table * Updated values for GRIB2CLIB_NAME and BUFRLIB_NAME * Updated for proj, eckit, and atlas * Feature #2761 develop seneca (#2762) * Per #2761, define runtime python version for testing rather than using the default version which no longer exists in /usr/local * Per #2761, fix setting ci-skip-all * Per #2761, patching test_util.R to use the -C command line option for ncdiff. I did test running comp_dir.sh with this change and confirmed that it now runs to completion. * #2652 Added find_var_by_standard_name and separated common codes to find_xy_vars * #2757 Get the email list from the environment variable MET_CRON_EMAIL_LIST__MET (or MET_CRON_EMAIL_LIST_) * #2757 THe SonarQube token and URL are replaced by ujsing the environment variable SONAR_TOKEN_VALUE and SONAR_SERVER_URL * #2757 The SonarQube token and URL are replaced with the pre-defined strings, SONAR_TOKEN_VALUE and SONAR_SERVER_URL * Bugfix #2670 develop --enable-python (#2768) * Update install_met_env.acorn_py3.10 * Update install_met_env.wcoss2_py3.10 * Feature #2776 cleanup (#2777) * Per #2776, delete stale prob_pair_info.h/.cc, wwmca_utils.h/.cc, and rmw_analysis_utils.h/.cc files that were not being compiled by their Makefiles. * Per #2776, update Makefile to compile the test_read_rmw utility. * Per #2776, add Makefile for the vx_python3_utils test utility directory. * add rpath for atlas and eckit lib dirs so dynamic libraries can be found when running on seneca * only set -L and -I arguments for atlas and eckit if the appropriate environment variable is set -- this matches how it is handled for other external library dependencies * Per #2776, just whitespace and capitalization --------- Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> * Bugfix #2782 develop MASSDEN (#2783) * Per #2782, port over fixes from the bugfix_2782_main_v11.1_MASSDEN branch over to the bugfix branch for develop. Will also add new GRIB2 filtering options in this branch. * Per #2782, add support for 4 new GRIB2 filtering options for GRIB2_aerosol_type, GRIB2_aerosol_interval_type, GRIB2_aerosol_size_lower, and GRIB2_aerosol_size_upper. These are useful in filtering the MASSDEN records in the RRFS smoke output files. * Per #2782, fix aerosol_size_lower() and aersol_size_upper() inline definitions. * Per #2782, add a unit test for GRIB2 table 4.48. * Per #2782, switch from strict equality to using the is_eq() function when checking the GRIB2_aerosol_size_lower and upper values since they're doubles and not ints. * Feature #2701 ismn (#2758) * Add support for ISMN soil moisture data * Per #2701, update ascii2nc.cc with the ismn file option. * Per #2701, update ascii2nc docs * Per #2701, store the depth for precip as 0. * Per #2701, parse the ISMN observation value from the correct column. * Per #2701, every time I run ascii2nc to I see a log message for 'DEBUG 1: Number of NDBC skipped files due to no lookup 0'. This is printed by the NdbcHandler destructor. Update the logic to only print a debug level 3 log message when the number of missing locations is greater than 0, 'DEBUG 3: Skipped 5 NDBC files whose locations are not defined in 'MET_BASE/table_files/ndbc_stations.xml'. Set the MET_NDBC_STATIONS environment variable to override this file.' * Per #2701, as instructed by @anewman89, store the average of the depth values rather than the maximum value. * Per #2701, add a test of processing the ISMN data through ascii2nc. * Per #2701, fix parsing of year and month to subtract 1900 and 1, respectively. * Per #2701, set use_var_id to true for ISMN inputs * Per #2701, even though we're mapping obs data to GRIB code names and units, we want to encode them with use_var_id = true and so we need to keep track of those var_id values. * Per #2701, fix typo in the name of the ascii2nc netcdf output file. --------- Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> --------- Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu> Co-authored-by: root <root@83062d57c5dd> Co-authored-by: Julie Prestopnik <jpresto@ucar.edu> Co-authored-by: Christina Kalb <kalb@ucar.edu> Co-authored-by: John Halley Gotway <johnhg@ucar.edu> Co-authored-by: Howard Soh <hsoh@seneca.rap.ucar.edu> Co-authored-by: Howard Soh <hsoh@ucar.edu> Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com> Co-authored-by: metplus-bot <97135045+metplus-bot@users.noreply.github.com>
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