Feature 50 improve logging (#333) #98
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| name: Compare two databases | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - develop | |
| - develop-ref | |
| - feature_* | |
| - issue_* | |
| - main_* | |
| - bugfix_* | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| jobs: | |
| run-shell-command: | |
| runs-on: ubuntu-20.04 | |
| name: job_run | |
| env: | |
| DB_DATABASE: mv_ci_prod | |
| DB_USER: root | |
| DB_PASSWORD: 'root' | |
| DB_HOST: localhost | |
| steps: | |
| - name: check out headnew code | |
| uses: actions/checkout@v4 | |
| with: | |
| path: headnew | |
| ref: ${{github.event.pull_request.head.ref}} | |
| repository: ${{github.event.pull_request.head.repo.full_name}} | |
| - name: check out baseold code | |
| uses: actions/checkout@v4 | |
| with: | |
| path: baseold | |
| ref: ${{github.event.pull_request.base.ref}} | |
| - name: start mysql | |
| run: | | |
| sudo systemctl start mysql | |
| python3 -V | |
| pip3 --version | |
| mysql -e 'SELECT VERSION();' -uroot -proot | |
| mysql -e 'CREATE DATABASE mv_ci_prod;' -uroot -proot | |
| mysql -e 'SOURCE /home/runner/work/METdataio/METdataio/baseold/METdbLoad/sql/mv_mysql.sql;' -uroot -proot mv_ci_prod | |
| mysql -e 'CREATE DATABASE mv_ci_new;' -uroot -proot | |
| mysql -e 'SOURCE /home/runner/work/METdataio/METdataio/headnew/METdbLoad/sql/mv_mysql.sql;' -uroot -proot mv_ci_new | |
| - name: multiline script | |
| run: | | |
| pip3 install numpy | |
| pip3 install pandas | |
| pip3 install pymysql | |
| pip3 install lxml | |
| pip3 install pytest | |
| - name: change default python to python 3 | |
| shell: bash | |
| run: | | |
| which python3 | |
| sudo update-alternatives --install /usr/bin/python python /usr/bin/python3 10 | |
| - name: python command | |
| run: | | |
| import pymysql | |
| import numpy | |
| import pandas | |
| import lxml | |
| conn = pymysql.connect(host='localhost',port=3306,user='root',passwd='root',db='mv_ci_prod') | |
| cur = conn.cursor() | |
| cur.execute('select database();') | |
| print(cur.fetchall()) | |
| cur.execute('show tables;') | |
| print(cur.fetchall()) | |
| shell: python | |
| - name: get data | |
| shell: bash | |
| run: | | |
| mkdir metdata | |
| cd metdata | |
| curl 'https://dtcenter.ucar.edu/dfiles/code/METplus/METdataio/sample_data-met_out_v9.1.tgz' -o m91.tgz | |
| tar -xvf m91.tgz | |
| # Note that both XML files are taken from the new branch, so they can match if changed | |
| - name: run METdbload prod | |
| shell: bash | |
| run: | | |
| export PYTHONPATH=${GITHUB_WORKSPACE}/baseold | |
| cd ${GITHUB_WORKSPACE}/baseold/METdbLoad/ush | |
| python met_db_load.py ${GITHUB_WORKSPACE}/headnew/METdbLoad/test/load_met_gha_prod.xml | |
| mysql -e 'SHOW TABLE STATUS WHERE `rows` > 0;' -uroot -proot mv_ci_prod | |
| - name: run METdbload new | |
| shell: bash | |
| run: | | |
| export PYTHONPATH=${GITHUB_WORKSPACE}/headnew | |
| cd ${GITHUB_WORKSPACE}/headnew/METdbLoad/ush | |
| python met_db_load.py ${GITHUB_WORKSPACE}/headnew/METdbLoad/test/load_met_gha_new.xml | |
| mysql -e 'SHOW TABLE STATUS WHERE `rows` > 0;' -uroot -proot mv_ci_new | |
| - name: run test_tables to compare tables in 2 databases | |
| shell: bash | |
| run: python ${GITHUB_WORKSPACE}/headnew/METdbLoad/test/test_tables.py |