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Update Develop-ref after #1932 #1955

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Nov 16, 2022
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b2e23f1
Fixing spacing #1049
lisagoodrich Mar 9, 2022
083bc97
feature 1471 fix current field info in output_prefix (#1500)
georgemccabe Mar 9, 2022
c797356
Feature 1503 v4.1.0 rc1 (#1504)
georgemccabe Mar 10, 2022
df30e2e
update version after rc1 release to reflect development towards 4.1.0…
georgemccabe Mar 10, 2022
c6c9d67
Corrected documentation title name
j-opatz Mar 11, 2022
081f73f
bugfix 1486 pb2nc window variables (#1507)
georgemccabe Mar 11, 2022
d5693f2
feature 1443 document probabilistic field settings (#1508)
georgemccabe Mar 11, 2022
8c0e638
feature 943 document referencing current level (#1509)
georgemccabe Mar 14, 2022
cae126c
feature 1510 v4.1.0 Release (#1511)
georgemccabe Mar 14, 2022
a084e61
updated release guide to reflect updated process to trigger reference…
georgemccabe Mar 14, 2022
0b61eed
update version to reflect development towards 5.0.0-beta1 release
georgemccabe Mar 14, 2022
c8aa3f4
Merge branch 'develop' into feature_fix_bad_templates
georgemccabe Mar 15, 2022
0fc46b6
Merge branch 'develop' into feature_1402_config_cleanup
georgemccabe Mar 15, 2022
7046183
rearrange variables and added link to user's guide
georgemccabe Mar 15, 2022
e3c5ee1
Feature 673 MET (#1517)
JohnHalleyGotway Mar 17, 2022
07d50e3
set MET docker repo to dtcenter/met if forcing a specific MET tag to …
georgemccabe Mar 30, 2022
79bc116
pass variable to tell docker build script that an external workflow t…
georgemccabe Mar 30, 2022
d895b3d
echo output variables from job control job so they can be reviewed in…
georgemccabe Mar 30, 2022
33f1ae8
minor fix for consistency in logs, ci-skip-all
georgemccabe Mar 30, 2022
165d93e
Feature 1399 usecase cable (#1538)
j-opatz Apr 1, 2022
9a063c1
Merge branch 'develop-ref' into develop
j-opatz Apr 1, 2022
566be73
Update UserScript_fcstGFS_obsERA_WeatherRegime.conf
CPKalb Apr 4, 2022
2935259
Feature component links (#1518)
JohnHalleyGotway Apr 7, 2022
bfda7fc
Feature 770 3rd person (#1564)
lisagoodrich Apr 8, 2022
18ab207
bugfix 1555 develop clear args properly (#1562)
georgemccabe Apr 8, 2022
ebc78f2
Fixed bug in classification text file (#1568)
CPKalb Apr 20, 2022
aa8781b
Merge branch 'develop-ref' into develop
georgemccabe Apr 20, 2022
1c2d8d5
bugfix 1534 develop fix removal of semi-colon at end of list (#1535)
georgemccabe Apr 20, 2022
fc49ed3
fixed typo missed in #1477
georgemccabe Apr 28, 2022
30c1c09
feature 33 (internal) disable UserScript wrapper (#1607)
georgemccabe May 11, 2022
e708d57
METplus-Internal #14 Initial release
May 11, 2022
59a1181
METplus-Internal #16 initial release for python scanning
May 11, 2022
d60aa61
METplus-Internal #17 Disable SonarQube related path for Docker
May 11, 2022
2d1a7b4
change Linked issue/Development issue ci-skip-all
lisagoodrich May 13, 2022
53d19a9
change Linked issue/Development issue ci-skip-all
lisagoodrich May 13, 2022
f9b0e97
change Linked issue/Development issue ci-skip-all
lisagoodrich May 13, 2022
851dc27
change Linked issue/Development issue ci-skip-all
lisagoodrich May 13, 2022
168be3f
change Linked issue/Development issue
lisagoodrich May 13, 2022
95b5b55
Updated METexpress release guide to reflect new use of github
mollybsmith-noaa May 13, 2022
265ca0c
Merge pull request #1615 from dtcenter/feature_update_metexpress_rele…
mollybsmith-noaa May 13, 2022
14956a3
added section for RAL machines
j-opatz May 14, 2022
9767922
Fix location of VERSION file
jprestop May 16, 2022
c10e055
Merge pull request #1611 from dtcenter/feature_METplus-Internal_17_so…
hsoh-u May 17, 2022
e3392ba
Hofix for the develop branch to correct typo in the internal_tests/sc…
JohnHalleyGotway May 20, 2022
337c714
install requests python package in Docker image used in run_tests cus…
georgemccabe May 24, 2022
e417803
test using specific version of alpine Docker image to see if the late…
georgemccabe May 24, 2022
aa3c1b5
Revert "test using specific version of alpine Docker image to see if …
georgemccabe May 24, 2022
a4ef02d
Change Linked issue/Development issue ci-skip-all
jprestop May 24, 2022
b9cef28
Feature 1627 release guide (#1630)
jprestop May 24, 2022
324da1b
feature 1608 METDbLoad read MODE/MTD txt files (#1628)
georgemccabe May 25, 2022
f84edfc
#1614 Cycloneplotter METplotlibDeprecationWarning observed in Matplot…
bikegeek Jun 6, 2022
e9ba518
updated comment to note that variables in the section are optional
georgemccabe Jun 7, 2022
5259615
bugfix #1641 develop StatAnalysis list format (#1646)
georgemccabe Jun 7, 2022
aa3c537
feature 1586 added wrapper-specific version of probabilistic config v…
georgemccabe Jun 8, 2022
f8af9ba
Feature 1603 met data db mode (#1649)
CPKalb Jun 9, 2022
508d187
Merge branch 'develop-ref' into develop
georgemccabe Jun 9, 2022
1d3e414
Feature 1159 discussions (#1634)
jprestop Jun 10, 2022
97995af
Added QC_FLAGS and ADP to the arguments correctly (#1654)
hankenstein2 Jun 13, 2022
4dcc255
Updating order to remove data before creating new tarfile
j-opatz Jun 15, 2022
a31407f
Merge branch 'develop' into feature_1402_config_cleanup
georgemccabe Jun 15, 2022
b0110a7
added URL for use case documentation
georgemccabe Jun 15, 2022
3ea6668
feature 1585 multi-variate MODE support (#1665)
georgemccabe Jun 16, 2022
41500be
Feature 1650 update hovmoeller (#1666)
bikegeek Jun 22, 2022
291c26a
feature 1599 set climo_mean/stdev using VAR<n> variable syntax (#1658)
georgemccabe Jun 22, 2022
45c3d2f
feature 1653 develop climo day_interval NA value (#1671)
georgemccabe Jun 22, 2022
2912312
feature #1673 5.0.0-beta1 release (#1674)
georgemccabe Jun 22, 2022
2e4b709
update version for development towards 5.0.0-beta2
georgemccabe Jun 22, 2022
b69616c
added logic to switch DockerHub repo used to obtain MET to use dtcent…
georgemccabe Jun 22, 2022
0375f62
Updates to the release instructions based on MET version 11.0.0-beta1…
JohnHalleyGotway Jun 22, 2022
1fd9313
Merge branch 'develop' of https://github.com/dtcenter/METplus into de…
JohnHalleyGotway Jun 22, 2022
7a41400
changed version back to fix release
georgemccabe Jun 22, 2022
38957a3
Merge branch 'develop' of github.com:dtcenter/METplus into develop
georgemccabe Jun 22, 2022
0311886
changed version to show development towards 5.0.0-beta2 release after…
georgemccabe Jun 22, 2022
cce7b49
Merge branch 'develop' into feature_1402_config_cleanup
georgemccabe Jun 30, 2022
6ae90f2
per #1402, rearrange and clean up config file
georgemccabe Jun 30, 2022
7b02fe7
added missing config variables from CyclonePlotter to glossary and wr…
georgemccabe Jul 6, 2022
6c45365
per #1402, clean up use case conf files, ci-run-all-diff
georgemccabe Jul 6, 2022
2d76352
per #1402, clean up Point2Grid conf file
georgemccabe Jul 6, 2022
a24b6ab
Feature 1531 use case CFSv2 s2s (#1587)
j-opatz Jul 6, 2022
586dbb1
Merge branch 'develop-ref' into develop
j-opatz Jul 6, 2022
551f8c7
per #1402, clean up rest of met_tool_wrapper use case conf files, ci-…
georgemccabe Jul 6, 2022
501dad2
feature 1669 now/today support in StatAnalysis (#1683)
georgemccabe Jul 7, 2022
f9675ca
feature 1684 use case HSS s2s (#1688)
j-opatz Jul 11, 2022
1b0f46b
removed conf file that is no longer needed
georgemccabe Jul 13, 2022
b2c1621
updated scripts to create Docker image containing Conda environment f…
georgemccabe Jul 14, 2022
f79c809
Feature_770_3rd_person (#1685)
lisagoodrich Jul 14, 2022
c7e275b
Feature 685 group pytests (#1692)
georgemccabe Jul 14, 2022
c024bd7
Merge branch 'develop' into feature_1402_config_cleanup
georgemccabe Jul 14, 2022
e6825c4
feature #1402 config cleanup - met_tool_wrapper (#1690)
georgemccabe Jul 14, 2022
049fb1c
per #1402, clean up use cases in air_quality_and_comp, climate, and d…
georgemccabe Jul 14, 2022
f98e178
Merge branch 'develop' into feature_1402_config_cleanup_model_app
georgemccabe Jul 14, 2022
c0787cb
per #1402, clean up use cases in marine_and_cryosphere
georgemccabe Jul 14, 2022
2da1f91
free up disk space in GHA runner environment (#1698)
georgemccabe Jul 15, 2022
0e97a84
Merge branch 'develop' into feature_1402_config_cleanup_model_app
georgemccabe Jul 15, 2022
2116f06
changed URL to use latest instead of develop because even though the …
georgemccabe Jul 15, 2022
22a2737
per #1402, clean up use case config files for medium_range use cases
georgemccabe Jul 15, 2022
a20c0bb
Feature 1694 s2s subgroups (#1697)
georgemccabe Jul 18, 2022
9b5a35e
Merge branch 'develop-ref' into develop
georgemccabe Jul 18, 2022
84f2f8c
Merge branch 'develop' into feature_1402_config_cleanup_model_app
georgemccabe Jul 19, 2022
664ec51
per #1402, rearrange and clean up config files for precipitation use …
georgemccabe Jul 19, 2022
ce09848
per #1402, rearrange and clean up config files for s2s, s2s_mid_lat, …
georgemccabe Jul 22, 2022
c0bd80b
fix logic that logs default value used to properly output False vs. e…
georgemccabe Jul 22, 2022
05156fd
fixed logic to not require MTD_SINGLE_RUN to be set for MTD by using …
georgemccabe Jul 22, 2022
2787978
added wrapped StatAnalysis config file back because the config file f…
georgemccabe Jul 22, 2022
ed05775
added missing import needed if an error occurs
georgemccabe Jul 22, 2022
1cd974f
added wrapped StatAnalysis config file back because the config file f…
georgemccabe Jul 22, 2022
d7f7cb8
run use cases that failed in the last run and ci-run-diff
georgemccabe Jul 22, 2022
ef6f3a6
fixed path that used CONFIG_DIR because variable was removed
georgemccabe Jul 22, 2022
ccfa89a
turn off use cases that passed to test again
georgemccabe Jul 22, 2022
4e2c002
per #1402, rearrange and clean up config files for short_range use cases
georgemccabe Jul 22, 2022
da4e01b
per #1402, rearrange and clean up space_weather config files
georgemccabe Jul 22, 2022
c5b2a9a
per #1402, updated another use case conf
georgemccabe Jul 22, 2022
dcc8028
add support for setting match_points in the TCPairs wrapped config fi…
georgemccabe Jul 22, 2022
40ee888
per #1402, rearrange and clean up config files for tc_and_extra_tc us…
georgemccabe Jul 22, 2022
502ae62
Feature 650 questions2ask (#1573)
lisagoodrich Jul 25, 2022
23bda51
bugfix #1706 fix PhaseDiagram use case to avoid writing into INPUT_BA…
georgemccabe Jul 26, 2022
45da99e
feature #1566 Use Python 3.8.6 for automated tests (#1710)
georgemccabe Jul 26, 2022
61d2c19
Merge branch 'develop-ref' into develop
georgemccabe Jul 26, 2022
20af6cb
change job control rules to ignore commit message keywords if running…
georgemccabe Jul 26, 2022
6ad33e7
Merge branch 'develop' into feature_1402_config_cleanup_model_app
georgemccabe Jul 26, 2022
f58f294
bugfix #1713 develop METPLOTPY_BASE (#1715)
georgemccabe Jul 27, 2022
dd5c2eb
turn off use cases
georgemccabe Jul 27, 2022
367d111
Merge branch 'develop' into feature_1402_config_cleanup_model_app
georgemccabe Jul 27, 2022
b5a617a
feature #1566 Python 3.8.6 documentation (#1717)
georgemccabe Jul 27, 2022
a4f4af4
if TC_PAIRS_MATCH_POINTS is unset, set 'match_points = TRUE;'. This i…
georgemccabe Jul 27, 2022
6471b51
fixed TCPairs unit tests to handle default value for match_points
georgemccabe Jul 27, 2022
e2947df
bugfix #1691 remove whitespace from output file paths (#1721)
georgemccabe Jul 27, 2022
a41115f
added variables that are needed for use case and were accidentally re…
georgemccabe Jul 27, 2022
4d318db
log error and increment error count if required lat/lon bound variabl…
georgemccabe Jul 27, 2022
748c098
skip metplus_final.conf in check for new output to prevent false alar…
georgemccabe Jul 28, 2022
994161c
Update index.rst
bikegeek Aug 3, 2022
8a51511
Update metdatadb.rst
bikegeek Aug 3, 2022
6a49dfd
renamed from metdatadb
bikegeek Aug 3, 2022
774d31f
replacing all other instances of metdatdb/METdatadb with metdataio/ME…
bikegeek Aug 3, 2022
84845a6
after renaming directory from metdatadb to metdataio
bikegeek Aug 3, 2022
7ec1a49
replace METdatadb with METdataio
bikegeek Aug 3, 2022
7e04960
copied and replaced with metdataio filenames
bikegeek Aug 3, 2022
0ba0546
replaced with metdataio version
bikegeek Aug 3, 2022
a3fcc80
Update the Release Guide while creating the MET-11.0.0-beta2 developm…
JohnHalleyGotway Aug 3, 2022
a585524
Merge pull request #1722 from dtcenter/feature_1402_config_cleanup_mo…
hankenstein2 Aug 3, 2022
8bd24e6
Changed version number
hankenstein2 Aug 3, 2022
8fa2ad8
Added release notes
hankenstein2 Aug 3, 2022
b060e67
Merge pull request #1727 from dtcenter/feature_1726_V5.0.0-beta2
hankenstein2 Aug 3, 2022
1625f45
Update the labels scripts by adding 1 new one and renaming metdatadb …
JohnHalleyGotway Aug 4, 2022
f50294c
updated pandas version used for METdataio use cases to use 1.2.3 inst…
georgemccabe Aug 8, 2022
5c0e8b8
update version to show development towards beta3 release
georgemccabe Aug 10, 2022
29d80ed
Changed METdatadb references to METdataio
jprestop Aug 16, 2022
64d5ee0
Adding modulefiles for installation on various machines. (#1750)
jprestop Aug 17, 2022
91c1a65
Feature 1746 recreate release (#1751)
jprestop Aug 17, 2022
68ff502
Feature #1489 plot point obs wrapper (#1753)
georgemccabe Aug 22, 2022
2229e77
Merge branch 'develop-ref' into develop
georgemccabe Aug 22, 2022
d707507
Fixing typo
jprestop Aug 23, 2022
dce51bc
Feature #1657 clean up directory creation (#1756)
georgemccabe Aug 24, 2022
2d405db
Feature update labels (#1765)
jprestop Aug 26, 2022
e8804eb
Merge branch 'develop-ref' into develop
georgemccabe Aug 26, 2022
9216c6b
feature dtcenter/METplus-Internal#20 add user ID to log output (#1771)
georgemccabe Aug 30, 2022
458714c
Per dtcenter/METplus-Internal#20, change log output to always include…
georgemccabe Aug 30, 2022
fb2d093
Per dtcenter/METplus-Internal#20, fixed bug introduced from commit 45…
georgemccabe Sep 1, 2022
ffd9baa
Revert "Per dtcenter/METplus-Internal#20, fixed bug introduced from c…
georgemccabe Sep 1, 2022
d3f6949
Revert "Per dtcenter/METplus-Internal#20, change log output to always…
georgemccabe Sep 1, 2022
1fdc55e
per dtcenter/METplus-Internal#20, implemented working solution to use…
georgemccabe Sep 1, 2022
2a93c36
Merge branch 'develop-ref' into develop
georgemccabe Sep 6, 2022
62533ca
change file path based on change to MODE output from dtcenter/MET#2251
georgemccabe Sep 6, 2022
b254020
fix Contributor's Guide GitHub Workflow page (#1774)
georgemccabe Sep 7, 2022
cb80ee9
Feature dtcenter/METplus-Internal#32 add timestamp to final conf and …
georgemccabe Sep 8, 2022
6043797
Feature dtcenter/METplus-Internal#15 checksum for release (#1769)
georgemccabe Sep 8, 2022
a32de2b
Feature dtcenter/METplus-Internal#32 change SCRUB_STAGING_DIR default…
georgemccabe Sep 8, 2022
e9732cd
fix to allow wildcard characters in UserScript input templates, ci-ru…
georgemccabe Sep 8, 2022
8ea203a
per #1787, allow NA instead of only integers for climo_mean/stdev hou…
georgemccabe Sep 9, 2022
36a8d1e
Merge branch 'develop' of github.com:dtcenter/METplus into develop
georgemccabe Sep 9, 2022
f7ec114
per #1787, added test for setting NA for climo_mean hour_interval
georgemccabe Sep 9, 2022
a26e18e
Merge branch 'develop' into feature_test_user_script_fix
georgemccabe Sep 9, 2022
a15989b
Updating note format
jprestop Sep 9, 2022
c1e6cbc
update Python version to 3.8.6
georgemccabe Sep 9, 2022
3c235a1
Revert "update Python version to 3.8.6"
georgemccabe Sep 9, 2022
1fe92cc
added return value checking to error and exit a non-zero value if doc…
georgemccabe Sep 9, 2022
08263d6
update instructions to find issues for a bugfix release (#1790)
georgemccabe Sep 19, 2022
bfe783e
Feature dtcenter/METplus-Internal#34 set the log time to UTC/GMT (#1793)
georgemccabe Sep 19, 2022
60353b6
Feature #1330 MJO ENSO use case (#1794)
georgemccabe Sep 19, 2022
728707c
Merge branch 'develop-ref' into develop
georgemccabe Sep 19, 2022
eac157d
Feature #1816 ensemble vx removal from EnsembleStat (#1820)
georgemccabe Sep 21, 2022
5142828
Feature #1816 rename cases and files (#1823)
georgemccabe Sep 21, 2022
38ab383
Move files under internal_tests into internal/tests (#1818)
georgemccabe Sep 21, 2022
c398dbc
Merge branch 'develop-ref' into develop
georgemccabe Sep 21, 2022
b299e1e
info for new use case
j-opatz Sep 21, 2022
e90df55
Merge branch 'develop' into feature_1808_POE_temp_useCase
j-opatz Sep 21, 2022
83fc496
renamed picture of unrelated use case to properly display
j-opatz Sep 21, 2022
b3d39ec
Minor tweak to the release guide instructions for MET development rel…
JohnHalleyGotway Sep 21, 2022
5d9072b
Merge branch 'develop' of https://github.com/dtcenter/METplus into de…
JohnHalleyGotway Sep 21, 2022
fe20623
Feature #1817 5.0.0-beta3 release (#1825)
georgemccabe Sep 21, 2022
b8a8aac
Update VERSION
georgemccabe Sep 21, 2022
0b8505d
updated file name
j-opatz Sep 27, 2022
cace0bd
updated MET file locations
j-opatz Sep 29, 2022
aa39d9a
explicitly set units for obs read via python embedding since PR dtcen…
georgemccabe Oct 3, 2022
64750a8
turn off precip use case group
georgemccabe Oct 3, 2022
0e19ad3
Feature #1829 set unique ID in config (#1830)
georgemccabe Oct 4, 2022
1bb2df4
fixed typo in use case setting that causes differences in the test ou…
georgemccabe Oct 4, 2022
0181726
Feature #1687 RuntimeFreq read only files needed for given run (#1841)
georgemccabe Oct 5, 2022
0ab0b2c
Merge pull request #1839 from dtcenter/feature_1808_POE_temp_useCase
hankenstein2 Oct 5, 2022
40e05c0
Merge branch 'develop-ref' into develop
georgemccabe Oct 5, 2022
d7c117f
Feature 1847 release (#1850)
jprestop Oct 5, 2022
4427703
Feature #1863 fix GitHub Actions warnings (#1864)
georgemccabe Oct 13, 2022
00fd664
Feature #1874 prevent false diffs (#1875)
georgemccabe Oct 20, 2022
3d2e1d8
Merge branch 'develop-ref' into develop
georgemccabe Oct 20, 2022
1772499
Feature 1842 StatAnalysis - multiple issues (#1869)
georgemccabe Oct 24, 2022
d512507
Bugfix #1884 develop PCPCombine {custom} in subtract method (#1887)
georgemccabe Oct 24, 2022
d8708ac
Feature 1852 use case physics tendency (#1881)
bikegeek Oct 25, 2022
0fa0927
Feature #1893 StatAnalysis custom looping (#1894)
georgemccabe Oct 25, 2022
30130f2
Merge branch 'develop-ref' into develop
georgemccabe Oct 25, 2022
6fb3394
Feature dtcenter/METplus-Internal#24 test failure (#1895)
georgemccabe Oct 26, 2022
e2ef698
updated version for creating release (#1897)
georgemccabe Oct 26, 2022
73f6070
update release number for development towards beta5
georgemccabe Oct 26, 2022
4134118
Adding one sentence to about daily follow up on discussions.
jprestop Oct 28, 2022
3664336
initial changes for new use case
j-opatz Oct 28, 2022
e4f50a0
updated paths, documentation
j-opatz Nov 1, 2022
38e8b46
updated automated testing files
j-opatz Nov 1, 2022
3c49c3d
Feature #344 rearrange utils (#1900)
georgemccabe Nov 1, 2022
1e44a0b
first additions for new use case, corrected documentation for old use…
j-opatz Nov 3, 2022
e599477
Move Docker scripts to be consistent with other METplus components (#…
georgemccabe Nov 3, 2022
97580bb
added picture
j-opatz Nov 3, 2022
66cb3ce
Correct spelling mistake
j-opatz Nov 4, 2022
45d46da
Merge pull request #1908 from dtcenter/feature_1482_useCase_buoyData
hankenstein2 Nov 4, 2022
0cbf8c4
Merge pull request #1914 from dtcenter/feature_1828_useCase_cocorahs
hankenstein2 Nov 4, 2022
d329275
handle if input to format_thresh is already a list
georgemccabe Nov 4, 2022
2ac94e2
Revert "handle if input to format_thresh is already a list"
georgemccabe Nov 4, 2022
e444854
handle if input to format_thresh is already a list
georgemccabe Nov 4, 2022
1990a5b
per #1910, added time util function to add field info to time info di…
georgemccabe Nov 4, 2022
9ac11e8
change logic to preserve full level string for [fcst/obs]_level so Se…
georgemccabe Nov 4, 2022
0081bd3
try setting all input values in output dictionary, ci-run-all-diff
georgemccabe Nov 4, 2022
eb8d20a
removed commented code
georgemccabe Nov 7, 2022
d674824
Merge branch 'develop' of github.com:dtcenter/METplus into develop
georgemccabe Nov 7, 2022
185e90e
add quotes around input files to plot_point_obs command to allow supp…
georgemccabe Nov 7, 2022
0d0c192
Merge branch 'develop' into bugfix_1910_develop_ensemble_stat_lev_in_…
georgemccabe Nov 7, 2022
6d12cb5
put all arguments on single line
georgemccabe Nov 7, 2022
1b3b91d
remove commented code
georgemccabe Nov 7, 2022
f67106f
per #1910, added unit tests to ensure that level is set properly in t…
georgemccabe Nov 7, 2022
2c1a065
Merge branch 'develop-ref' into develop
georgemccabe Nov 7, 2022
9d53f02
added script to create geovista conda environment via Docker to use i…
georgemccabe Nov 10, 2022
c930429
Feature 1561 use case ugrid python embedding (#1927)
willmayfield Nov 11, 2022
ecb04d7
Feature 1453 use case iodav2 python embedding (#1930)
willmayfield Nov 11, 2022
5ed10ae
Merge branch 'develop-ref' into develop
georgemccabe Nov 11, 2022
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118 changes: 114 additions & 4 deletions docs/Users_Guide/glossary.rst
Original file line number Diff line number Diff line change
Expand Up @@ -7569,22 +7569,22 @@ METplus Configuration Glossary
| *Used by:* PB2NC

TC_PAIRS_CONSENSUS<n>_NAME
Specify the value for nth 'consensus.name' in the MET configuration file for TCPairs.
Specify the value for the nth 'consensus.name' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_CONSENSUS<n>_MEMBERS
Specify the value for nth 'consensus.members' in the MET configuration file for TCPairs.
Specify the value for the nth 'consensus.members' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_CONSENSUS<n>_REQUIRED
Specify the value for nth 'consensus.required' in the MET configuration file for TCPairs.
Specify the value for the nth 'consensus.required' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_CONSENSUS<n>_MIN_REQ
Specify the value for nth 'consensus.min_req' in the MET configuration file for TCPairs.
Specify the value for the nth 'consensus.min_req' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

Expand Down Expand Up @@ -10093,3 +10093,113 @@ METplus Configuration Glossary
See :term:`STAT_ANALYSIS_FCST_VALID_END`.

| *Used by:* StatAnalysis

TC_PAIRS_DIAG_INFO_MAP<n>_DIAG_SOURCE
Specify the value for the nth 'diag_info_map.diag_source' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_INFO_MAP<n>_TRACK_SOURCE
Specify the value for the nth 'diag_info_map.track_source' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_INFO_MAP<n>_FIELD_SOURCE
Specify the value for the nth 'diag_info_map.field_source' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_INFO_MAP<n>_MATCH_TO_TRACK
Specify the value for the nth 'diag_info_map.match_to_track' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_INFO_MAP<n>_DIAG_NAME
Specify the value for the nth 'diag_info_map.diag_name' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_CONVERT_MAP<n>_DIAG_SOURCE
Specify the value for the nth 'diag_convert_map.diag_source' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_CONVERT_MAP<n>_KEY
Specify the value for the nth 'diag_convert_map.key' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_CONVERT_MAP<n>_CONVERT
Specify the value for the nth 'diag_convert_map.convert' in the MET configuration file for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_DIR<n>
Specify the (optional) directory for the nth -diag argument for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_TEMPLATE<n>
Specify the (optional) template for the nth -diag argument for TCPairs.

| *Used by:* TCPairs

TC_PAIRS_DIAG_SOURCE<n>
Specify the (optional) source string for the nth -diag argument for TCPairs.

| *Used by:* TCPairs

TC_STAT_DIAG_THRESH_NAME
Specify the value for 'diag_thresh_name' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_DIAG_THRESH_VAL
Specify the value for 'diag_thresh_val' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_INIT_DIAG_THRESH_NAME
Specify the value for 'init_diag_thresh_name' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_INIT_DIAG_THRESH_VAL
Specify the value for 'init_diag_thresh_val' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_LINE_TYPE
Specify the value for 'line_type' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_EVENT_EQUAL
Specify the value for 'event_equal' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_EVENT_EQUAL_LEAD
Specify the value for 'event_equal_lead' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_OUT_INIT_MASK
Specify the value for 'out_init_mask' in the MET configuration file for TCStat.

| *Used by:* TCStat

TC_STAT_OUT_VALID_MASK
Specify the value for 'out_valid_mask' in the MET configuration file for TCStat.

| *Used by:* TCStat

SERIES_ANALYSIS_MASK_GRID
Specify the value for 'mask.grid' in the MET configuration file for SeriesAnalysis.

| *Used by:* SeriesAnalysis

SERIES_ANALYSIS_MASK_POLY
Specify the value for 'mask.poly' in the MET configuration file for SeriesAnalysis.

| *Used by:* SeriesAnalysis
250 changes: 249 additions & 1 deletion docs/Users_Guide/release-notes.rst
Original file line number Diff line number Diff line change
Expand Up @@ -189,4 +189,252 @@ METplus Version 5.0.0 Beta 1 Release Notes (2022-06-22)
METplus Wrappers Upgrade Instructions
=====================================

Coming Soon!
EnsembleStat/GenEnsProd
-----------------------

Note: If :ref:`ensemble_stat_wrapper` is not found in the :term:`PROCESS_LIST`
for any use cases, then this section is not relevant.

The METplus v5.0.0 coordinated release includes changes that remove ensemble
product generation from EnsembleStat. GenEnsProd is now required to generate
ensemble products. There are 3 situations listed below that require slightly
different modifications.

Case 1: EnsembleStat only generating ensemble products
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

If the use case had been calling EnsembleStat **WITHOUT** the -grid_obs or
-point_obs command line options, we can assume it was only doing ensemble
post-processing.
That call to EnsembleStat should be replaced with a call to GenEnsProd instead.

Rename the following variables:
"""""""""""""""""""""""""""""""

FCST_ENSEMBLE_STAT_INPUT_DIR => GEN_ENS_PROD_INPUT_DIR

FCST_ENSEMBLE_STAT_INPUT_TEMPLATE => GEN_ENS_PROD_INPUT_TEMPLATE

ENSEMBLE_STAT_OUTPUT_DIR => GEN_ENS_PROD_OUTPUT_DIR

ENSEMBLE_STAT_OUTPUT_TEMPLATE => GEN_ENS_PROD_OUTPUT_TEMPLATE
**and add full filename template for NetCDF output file to end of value**, i.e.
/gen_ens_prod_{valid?fmt=%Y%m%d_%H%M%S}V_ens.nc

ENSEMBLE_STAT_N_MEMBERS => GEN_ENS_PROD_N_MEMBERS

ENSEMBLE_STAT_ENS_THRESH => GEN_ENS_PROD_ENS_THRESH

ENSEMBLE_STAT_ENS_VLD_THRESH => GEN_ENS_PROD_VLD_THRESH

ENSEMBLE_STAT_ENSEMBLE_FLAG_LATLON => GEN_ENS_PROD_ENSEMBLE_FLAG_LATLON
ENSEMBLE_STAT_ENSEMBLE_FLAG_MEAN => GEN_ENS_PROD_ENSEMBLE_FLAG_MEAN
ENSEMBLE_STAT_ENSEMBLE_FLAG_STDEV => GEN_ENS_PROD_ENSEMBLE_FLAG_STDEV
ENSEMBLE_STAT_ENSEMBLE_FLAG_MINUS => GEN_ENS_PROD_ENSEMBLE_FLAG_MINUS
ENSEMBLE_STAT_ENSEMBLE_FLAG_PLUS => GEN_ENS_PROD_ENSEMBLE_FLAG_PLUS
ENSEMBLE_STAT_ENSEMBLE_FLAG_MIN => GEN_ENS_PROD_ENSEMBLE_FLAG_MIN
ENSEMBLE_STAT_ENSEMBLE_FLAG_MAX => GEN_ENS_PROD_ENSEMBLE_FLAG_MAX
ENSEMBLE_STAT_ENSEMBLE_FLAG_RANGE => GEN_ENS_PROD_ENSEMBLE_FLAG_RANGE
ENSEMBLE_STAT_ENSEMBLE_FLAG_VLD_COUNT => GEN_ENS_PROD_ENSEMBLE_FLAG_VLD_COUNT
ENSEMBLE_STAT_ENSEMBLE_FLAG_FREQUENCY => GEN_ENS_PROD_ENSEMBLE_FLAG_FREQUENCY
ENSEMBLE_STAT_ENSEMBLE_FLAG_NEP => GEN_ENS_PROD_ENSEMBLE_FLAG_NEP
ENSEMBLE_STAT_ENSEMBLE_FLAG_NMEP => GEN_ENS_PROD_ENSEMBLE_FLAG_NMEP

ENSEMBLE_STAT_REGRID_TO_GRID => GEN_ENS_PROD_REGRID_TO_GRID
ENSEMBLE_STAT_REGRID_METHOD => GEN_ENS_PROD_REGRID_METHOD
ENSEMBLE_STAT_REGRID_WIDTH => GEN_ENS_PROD_REGRID_WIDTH
ENSEMBLE_STAT_REGRID_VLD_THRESH => GEN_ENS_PROD_REGRID_VLD_THRESH
ENSEMBLE_STAT_REGRID_SHAPE => GEN_ENS_PROD_REGRID_SHAPE
ENSEMBLE_STAT_NBRHD_PROB_WIDTH => GEN_ENS_PROD_NBRHD_PROB_WIDTH
ENSEMBLE_STAT_NBRHD_PROB_SHAPE => GEN_ENS_PROD_NBRHD_PROB_SHAPE
ENSEMBLE_STAT_NBRHD_PROB_VLD_THRESH => GEN_ENS_PROD_NBRHD_PROB_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_VLD_THRESH => GEN_ENS_PROD_NMEP_SMOOTH_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_SHAPE => GEN_ENS_PROD_NMEP_SMOOTH_SHAPE
ENSEMBLE_STAT_NMEP_SMOOTH_METHOD => GEN_ENS_PROD_NMEP_SMOOTH_METHOD
ENSEMBLE_STAT_NMEP_SMOOTH_WIDTH => GEN_ENS_PROD_NMEP_SMOOTH_WIDTH
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_DX => GEN_ENS_PROD_NMEP_SMOOTH_GAUSSIAN_DX
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_RADIUS => GEN_ENS_PROD_NMEP_SMOOTH_GAUSSIAN_RADIUS

If ENS_VAR<n>_ variables are not set:
"""""""""""""""""""""""""""""""""""""

If no FCST/OBS verification is being performed in the use case using another
wrapper, then rename the FCST_VAR<n> variables to ENS_VAR<n>.

e.g.

FCST_VAR1_NAME => ENS_VAR1_NAME
FCST_VAR1_LEVELS => ENS_VAR1_LEVELS
FCST_VAR2_NAME => ENS_VAR2_NAME
FCST_VAR2_LEVELS => ENS_VAR2_LEVELS
... etc

If FCST/OBS verification is being performed by another tool, then add
ENS_VAR<n> variables using the corresponding FCST_VAR<n> values.

e.g.

ENS_VAR1_NAME = {FCST_VAR1_NAME}
ENS_VAR1_LEVELS = {FCST_VAR1_LEVELS}
ENS_VAR2_NAME = {FCST_VAR2_NAME}
ENS_VAR2_LEVELS = {FCST_VAR2_LEVELS}
... etc

Remove the following variables:
"""""""""""""""""""""""""""""""

Remove any remaining ENSEMBLE_STAT_* variables that are no longer used.
Some examples:
Remove ENSEMBLE_STAT_ENSEMBLE_FLAG_RANK
Remove ENSEMBLE_STAT_ENSEMBLE_FLAG_WEIGHT
Remove ENSEMBLE_STAT_MESSAGE_TYPE
Remove ENSEMBLE_STAT_OUTPUT_FLAG_ECNT
Remove ENSEMBLE_STAT_OUTPUT_FLAG_RPS
Remove ENSEMBLE_STAT_OUTPUT_FLAG_RHIST
Remove ENSEMBLE_STAT_OUTPUT_FLAG_PHIST
Remove ENSEMBLE_STAT_OUTPUT_FLAG_ORANK
Remove ENSEMBLE_STAT_OUTPUT_FLAG_SSVAR
Remove ENSEMBLE_STAT_OUTPUT_FLAG_RELP
Remove ENSEMBLE_STAT_OUTPUT_FLAG_PCT
Remove ENSEMBLE_STAT_OUTPUT_FLAG_PSTD
Remove ENSEMBLE_STAT_OUTPUT_FLAG_PJC
Remove ENSEMBLE_STAT_OUTPUT_FLAG_PRC
Remove ENSEMBLE_STAT_OUTPUT_FLAG_ECLV
Remove ENSEMBLE_STAT_DUPLICATE_FLAG
Remove ENSEMBLE_STAT_SKIP_CONST
Remove ENSEMBLE_STAT_OBS_ERROR_FLAG
Remove ENSEMBLE_STAT_ENS_SSVAR_BIN_SIZE
Remove ENSEMBLE_STAT_ENS_PHIST_BIN_SIZE
Remove ENSEMBLE_STAT_CI_ALPHA
Remove ENSEMBLE_STAT_MASK_GRID
Remove ENSEMBLE_STAT_MASK_POLY
Remove ENSEMBLE_STAT_INTERP_FIELD
Remove ENSEMBLE_STAT_INTERP_VLD_THRESH
Remove ENSEMBLE_STAT_INTERP_SHAPE
Remove ENSEMBLE_STAT_INTERP_METHOD
Remove ENSEMBLE_STAT_INTERP_WIDTH
Remove ENSEMBLE_STAT_OBS_QUALITY_INC/EXC
Remove ENSEMBLE_STAT_GRID_WEIGHT_FLAG



Case 2: EnsembleStat performing ensemble verification but not generating ensemble products
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

No changes should be required for this case to continue to work as expected
except for removing configuration variables that are no longer used.
The use case will no longer generate a _ens.nc file and may create other files
(_orank.nc and txt) that contain requested output.

Rename the following variables:
"""""""""""""""""""""""""""""""

ENSEMBLE_STAT_ENSEMBLE_FLAG_MEAN => ENSEMBLE_STAT_NC_ORANK_FLAG_MEAN
ENSEMBLE_STAT_ENSEMBLE_FLAG_RANK => ENSEMBLE_STAT_NC_ORANK_FLAG_RANK
ENSEMBLE_STAT_ENSEMBLE_FLAG_WEIGHT => ENSEMBLE_STAT_NC_ORANK_FLAG_WEIGHT
ENSEMBLE_STAT_ENSEMBLE_FLAG_VLD_COUNT => ENSEMBLE_STAT_NC_ORANK_FLAG_VLD_COUNT


Remove the following variables:
"""""""""""""""""""""""""""""""

Remove any ENS_VAR<n>_* variables
Remove ENSEMBLE_STAT_ENSEMBLE_FLAG_*
ENSEMBLE_STAT_NBRHD_PROB_WIDTH
ENSEMBLE_STAT_NBRHD_PROB_SHAPE
ENSEMBLE_STAT_NBRHD_PROB_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_SHAPE
ENSEMBLE_STAT_NMEP_SMOOTH_METHOD
ENSEMBLE_STAT_NMEP_SMOOTH_WIDTH
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_DX
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_RADIUS


Case 3: EnsembleStat generating ensemble products and performing ensemble verification
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

GenEnsProd will need to be added to the PROCESS_LIST in addition to EnsembleStat to generate the ensemble verification output.

PROCESS_LIST = ..., EnsembleStat, GenEnsProd, ...

Set the input dir and template variables for GenEnsProd to match the values set for FCST input to EnsembleStat. Also set the output dir to match EnsembleStat output dir.

GEN_ENS_PROD_INPUT_DIR = {FCST_ENSEMBLE_STAT_INPUT_DIR}
GEN_ENS_PROD_INPUT_TEMPLATE = {FCST_ENSEMBLE_STAT_INPUT_TEMPLATE}
GEN_ENS_PROD_OUTPUT_DIR = {ENSEMBLE_STAT_OUTPUT_DIR}

If the EnsembleStat output template is set, then copy the value and add a template for the NetCDF output filename at the end following a forward slash ‘/’ character.

If ENSEMBLE_STAT_OUTPUT_TEMPLATE = {valid?fmt=%Y%m%d%H}
then set
GEN_ENS_PROD_OUTPUT_TEMPLATE = {valid?fmt=%Y%m%d%H}/gen_ens_prod_{valid?fmt=%Y%m%d_%H%M%S}V_ens.nc
or something similar.

If the EnsembleStat output template is not set, then set GenEnsProd’s template to the desired NetCDF output filename. Here is an example:

GEN_ENS_PROD_OUTPUT_TEMPLATE = gen_ens_prod_{valid?fmt=%Y%m%d_%H%M%S}V_ens.nc

Ensure that any downstream wrappers in the PROCESS_LIST are configured to read the correct GenEnsProd output file instead of the _ens.nc file that was previously generated by EnsembleStat.

If ENS_VAR<n>_ variables are not set, add ENS_VAR<n> variables using the corresponding FCST_ENSEMBLE_STAT_VAR<n> or FCST_VAR<n> values.
If FCST_ENSEMBLE_VAR<n>_* variables are set, then use only those values, otherwise use FCST_VAR<n>_*

e.g.

ENS_VAR1_NAME = {FCST_VAR1_NAME}
ENS_VAR1_LEVELS = {FCST_VAR1_LEVELS}
ENS_VAR2_NAME = {FCST_VAR2_NAME}
ENS_VAR2_LEVELS = {FCST_VAR2_LEVELS}


If any of the following ENSEMBLE_STAT_* variables are set in the configuration file, then rename them to the corresponding GEN_ENS_PROD_* variable:

ENSEMBLE_STAT_NBRHD_PROB_WIDTH => GEN_ENS_PROD_NBRHD_PROB_WIDTH
ENSEMBLE_STAT_NBRHD_PROB_SHAPE => GEN_ENS_PROD_NBRHD_PROB_SHAPE
ENSEMBLE_STAT_NBRHD_PROB_VLD_THRESH => GEN_ENS_PROD_NBRHD_PROB_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_VLD_THRESH => GEN_ENS_PROD_NMEP_SMOOTH_VLD_THRESH
ENSEMBLE_STAT_NMEP_SMOOTH_SHAPE => GEN_ENS_PROD_NMEP_SMOOTH_SHAPE
ENSEMBLE_STAT_NMEP_SMOOTH_METHOD => GEN_ENS_PROD_NMEP_SMOOTH_METHOD
ENSEMBLE_STAT_NMEP_SMOOTH_WIDTH => GEN_ENS_PROD_NMEP_SMOOTH_WIDTH
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_DX => GEN_ENS_PROD_NMEP_SMOOTH_GAUSSIAN_DX
ENSEMBLE_STAT_NMEP_SMOOTH_GAUSSIAN_RADIUS => GEN_ENS_PROD_NMEP_SMOOTH_GAUSSIAN_RADIUS
FCST_ENSEMBLE_STAT_INPUT_GRID_DATATYPE => GEN_ENS_PROD_INPUT_DATATYPE


If any of the following ENSEMBLE_STAT_* variables are set in the configuration file, then set the corresponding GEN_ENS_PROD_* variables to the same value or reference the ENSEMBLE_STAT_* version.

GEN_ENS_PROD_N_MEMBERS = {ENSEMBLE_STAT_N_MEMBERS}
GEN_ENS_PROD_ENS_THRESH = {ENSEMBLE_STAT_ENS_THRESH}
GEN_ENS_PROD_REGRID_TO_GRID = {ENSEMBLE_STAT_REGRID_TO_GRID}
GEN_ENS_PROD_REGRID_METHOD = {ENSEMBLE_STAT_REGRID_METHOD}
GEN_ENS_PROD_REGRID_WIDTH = {ENSEMBLE_STAT_REGRID_WIDTH}
GEN_ENS_PROD_VLD_THRESH = {ENSEMBLE_STAT_VLD_THRESH}
GEN_ENS_PROD_SHAPE = {ENSEMBLE_STAT_SHAPE}


If any of the following ENSEMBLE_STAT_ENSEMBLE_FLAG_* variables are set in the configuration file, then set the corresponding GEN_ENS_PROD_ENSEMBLE_FLAG_* variables to the same value.

ENSEMBLE_STAT_ENSEMBLE_FLAG_LATLON
ENSEMBLE_STAT_ENSEMBLE_FLAG_MEAN
ENSEMBLE_STAT_ENSEMBLE_FLAG_STDEV
ENSEMBLE_STAT_ENSEMBLE_FLAG_MINUS
ENSEMBLE_STAT_ENSEMBLE_FLAG_PLUS
ENSEMBLE_STAT_ENSEMBLE_FLAG_MIN
ENSEMBLE_STAT_ENSEMBLE_FLAG_MAX
ENSEMBLE_STAT_ENSEMBLE_FLAG_RANGE
ENSEMBLE_STAT_ENSEMBLE_FLAG_VLD_COUNT
ENSEMBLE_STAT_ENSEMBLE_FLAG_FREQUENCY
ENSEMBLE_STAT_ENSEMBLE_FLAG_NEP
ENSEMBLE_STAT_ENSEMBLE_FLAG_NMEP

e.g.

If ENSEMBLE_STAT_ENSEMBLE_FLAG_LATLON = TRUE
Add GEN_ENS_PROD_ENSEMBLE_FLAG_LATLON = TRUE

If any of the following ENSEMBLE_STAT_ENSEMBLE_FLAG_* variables are set in the configuration file, then rename them to the corresponding ENSEMBLE_STAT_NC_ORANK_FLAG_* variables.

ENSEMBLE_STAT_ENSEMBLE_FLAG_LATLON => ENSEMBLE_STAT_NC_ORANK_FLAG_LATLON
ENSEMBLE_STAT_ENSEMBLE_FLAG_MEAN => ENSEMBLE_STAT_NC_ORANK_FLAG_MEAN
ENSEMBLE_STAT_ENSEMBLE_FLAG_VLD_COUNT => ENSEMBLE_STAT_NC_ORANK_FLAG_VLD_COUNT
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