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A grammar of graphics for single-cell trajectories 📈

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dynverse/dynplot2

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ℹ️ Tutorials     ℹ️ Reference documentation

Common visualisation tools for single-cell trajectories

Installation

devtools::install_github("dynverse/dynplot")

On linux, udunits2 has to be installed:

  • Debian / Ubuntu / Linux mint: sudo apt-get install libudunits2-dev
  • Fedora / CentOS: sudo dnf install udunits2-devel

Usage

The package provides different ways to plot both the topology and cellular properties of a trajectory:

And to plot the expression and feature importances of many genes along the trajectory

Latest changes

Check out news(package = "dynwrap") or NEWS.md for a full list of changes.

Recent changes in dynplot 1.0.0 (28-03-2019)

  • Initial release of dynplot
  • Plotting of trajectories
  • Compatible with all methods of dynmethods

Dynverse dependencies

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A grammar of graphics for single-cell trajectories 📈

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