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{lang}[GCCcore/10.3.0] Python v3.9.5 #12755

Merged
merged 18 commits into from
May 22, 2021
Merged

{lang}[GCCcore/10.3.0] Python v3.9.5 #12755

merged 18 commits into from
May 22, 2021

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SebastianAchilles
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@SebastianAchilles SebastianAchilles commented Apr 26, 2021 •
edited by boegel
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(created using eb --new-pr)

Depends on

Not the latest version in the EC for Python v3.9.5 are:

  • docutils, because sphinx 3.5.4 has requirement docutils<0.17,>=0.12,
  • idna, because requests 2.25.1 has requirement idna<3,>=2.5,
  • keyring, because poetry 1.1.6 has requirement keyring<22.0.0,>=21.2.0,
  • cryptography 3.2.1, which is the most recent cryptography with OpenSSL 1.0.x support.

In addition:

  • cryptography 3.4.7 requires Rust, setuptools-rust and semantic_version as well as CRYPTOGRAPHY_DONT_BUILD_RUST=1,
  • blist is failing without modulename: False.

CC: @boegel @Micket @robert-mijakovic

@Micket Micket added the update label Apr 26, 2021
@Micket Micket added this to the next release (4.3.5?) milestone Apr 26, 2021
@SebastianAchilles SebastianAchilles changed the title {lang}[GCCcore/10.3.0] Python v3.9.4, Python v2.7.18 {lang}[GCCcore/10.3.0] Python v3.9.4 Apr 26, 2021
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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jrlogin11.jureca - Linux centos linux 8.3.2011, x86_64, AMD EPYC 7742 64-Core Processor, Python 3.6.8
See https://gist.github.com/6e07edc67c81224fc6884bf61a27a6fb for a full test report.

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lgtm
I don't see a reason to hold back on this any longer?

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Micket commented Apr 28, 2021

@boegelbot please test @ generoso

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@Micket: Request for testing this PR well received on generoso

PR test command 'EB_PR=12755 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_12755 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 16941

Test results coming soon (I hope)...

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it is of no use to you (unless you think I have a bug, which I don't).

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I don't see a reason to hold back on this any longer?

Maybe we want to include the changes from #12650
But I am not sure about that. What is your opinion?

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
generoso-c1-s-1 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/04df3bd91333883ebce062f55e1e82a3 for a full test report.

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Test report by @branfosj
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bear-pg0211u03a.bear.cluster - Linux RHEL 8.3, x86_64, Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz (cascadelake), Python 3.6.8
See https://gist.github.com/2ccd9b59a8299622f6ff63621bd6b372 for a full test report.

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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
ebvm.novalocal - Linux centos linux 8.3.2011, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/ce862523dc9e731c31008fc372dcfbe3 for a full test report.

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verdurin commented May 2, 2021

Test report by @verdurin
SUCCESS
Build succeeded for 7 out of 7 (1 easyconfigs in total)
nuc.lan - Linux Fedora 33, x86_64, Intel(R) Core(TM) i7-8650U CPU @ 1.90GHz, Python 3.9.2
See https://gist.github.com/e21b76acb523b527a013dda3d114808a for a full test report.

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Should we bump it to 3.9.5?

@SebastianAchilles
update easyconfigs Python-3.9.5-GCCcore-10.3.0.eb: update to v3.9.5, …
510d508 
…remove PYPI_SOURCE as it is now the default, remove duplicate empty line
@SebastianAchilles
update easyconfigs Python-3.9.5-GCCcore-10.3.0.eb: update checksum
e2a2503
@SebastianAchilles
update easyconfigs Python-3.9.5-GCCcore-10.3.0.eb: update extensions …
ecfcd60 
…(pip, setuptools, pbr, six, virtualenv, py_expression_eval, attrs, pytest, Pygments, docutils, Babel, Sphinx)
@SebastianAchilles SebastianAchilles changed the title {lang}[GCCcore/10.3.0] Python v3.9.4 {lang}[GCCcore/10.3.0] Python v3.9.5 May 10, 2021
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With last commits Python was update to v3.9.5.
'source_urls': [PYPI_SOURCE] was removed because it is now the default.
A duplicate empty line was removed.

In addition I updated the extension:

  • pip to 21.1.1
  • setuptools to 56.2.0
  • pbr to 5.6.0
  • six to 1.16.0
  • virtualenv to 20.4.6
  • py_expression_eval to 0.3.13
  • attrs to 21.2.0
  • pytest to 6.2.4
  • Pygments to 2.9.0
  • docutils to 0.17.1
  • Babel to 2.9.1
  • Sphinx to 4.0.0

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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jrlogin11.jureca - Linux centos linux 8.3.2011, x86_64, AMD EPYC 7742 64-Core Processor, Python 3.6.8
See https://gist.github.com/8127a53cf2cab9cf3807ff88e58dd1f9 for a full test report.

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boegel commented May 11, 2021

Test report by @boegel
FAILED
Build succeeded for 1 out of 2 (1 easyconfigs in total)
node3125.skitty.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/38f6deb6f8c317d183895be03a7f4c1c for a full test report.

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boegel commented May 11, 2021

Hmm, auto-download of extension sources is failing for me here (with latest develop branches)...

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boegel commented May 11, 2021 •
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@SebastianAchilles You'll probably need to keep the [PYPI_SOURCE] as source_urls for the extensions included here.

The issue is that the top-level source_urls is inherited for the extensions otherwise.

The PythonPackage easyblock was enhanced (cfr. easybuilders/easybuild-easyblocks#2364) to avoid having to specify PYPI_SOURCE in easyconfigs using PythonPackage or PythonBundle, but that doesn't really apply/work in this context...

@easybuilders easybuilders deleted a comment from boegelbot May 21, 2021
@easybuilders easybuilders deleted a comment from boegelbot May 21, 2021
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boegel commented May 21, 2021

The bot was acting stupid a bit, by posting the same comment over and over again.

That should be a lot less common now thanks to boegel/boegelbot@287e6e1

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boegel commented May 22, 2021

@boegelbot please test @ generoso
CORE_CNT=16

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@boegel: Request for testing this PR well received on generoso

PR test command 'EB_PR=12755 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_12755 --ntasks="16" ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 17281

Test results coming soon (I hope)...

- notification for comment with ID 846421867 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegel commented May 22, 2021

Test report by @boegel
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in total)
select-pika-c6gd-2xlarge-0001 - Linux centos linux 8.3.2011, AArch64, ARM UNKNOWN (graviton2), Python 3.6.8
See https://gist.github.com/71c176e01ddd5d0af7cefb31a73f141d for a full test report.

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boegel commented May 22, 2021

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3515.doduo.os - Linux RHEL 8.2, x86_64, AMD EPYC 7552 48-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/7ab20d1244f0c200996ae7a4bdf3d39d for a full test report.

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
generoso-x-1 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/ef5b507a7a5631869092b72490b7491c for a full test report.

@boegel
define $CARGO_HOME build dir when installing cryptography, to avoid i…
182ce44 
…nstallation failure when home directory is NFS mounted
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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jrlogin11.jureca - Linux centos linux 8.3.2011, x86_64, AMD EPYC 7742 64-Core Processor, Python 3.6.8
See https://gist.github.com/e62da7d666c5dc85d72eb4f21bfabe2c for a full test report.

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boegel commented May 22, 2021

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild2.novalocal - Linux centos linux 8.3.2011, POWER, IBM pSeries (emulated by qemu) (power9le), Python 3.6.8
See https://gist.github.com/65f651f4632a24d08bf30afcd7545778 for a full test report.

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boegel commented May 22, 2021

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (1 easyconfigs in total)
node2618.swalot.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz (haswell), Python 3.6.8
See https://gist.github.com/e6ea37277074308a31baf49060acf6ca for a full test report.

@boegel
Merge branch '20210426151203_new_pr_Python394' of github.com:Sebastia…
d3890b1 
…nAchilles/easybuild-easyconfigs into 20210426151203_new_pr_Python394
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boegel commented May 22, 2021

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3129.skitty.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/e78d607b6c311e731e44c83381cebfc0 for a full test report.

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boegel commented May 22, 2021

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
select-pika-c6gd-2xlarge-0001 - Linux centos linux 8.3.2011, AArch64, ARM UNKNOWN (graviton2), Python 3.6.8
See https://gist.github.com/0987598f5f79e48aaa4e58cbd50d518f for a full test report.

@easybuilders easybuilders deleted a comment from boegelbot May 22, 2021
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boegel commented May 22, 2021

Going in, thanks @SebastianAchilles!

@boegel boegel merged commit ec3676d into easybuilders:develop May 22, 2021
@seb45tian seb45tian mentioned this pull request Jul 6, 2021
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