{bio}[gompi/2021b] UShER v0.5.0 w/ Python 3.9.6

[sassy-crick]

(created using eb --new-pr)

[sassy-crick]

Requires:

• tbb
• MAFFT

[migueldiascosta]

@sassy-crick it sees you committed a new copy of easyconfigs.py at the top of the repo, it should be a change to test/easyconfigs/easyconfigs.py (otherwise, the changes look good to me)

[sassy-crick]

@migueldiascosta Thanks for your help. It does make more sense indeed.
I am not sure if I made a mess of it as these two lines were also removed, but not by me:

  # Shasta requires spoa 3.x
            'spoa': [(r'3\.4\.0', [r'Shasta-0\.8\.0-'])],

From the commit message I saw I think @boegel done something here. I don't want accidentally introduce a bug!

[migueldiascosta]

@sassy-crick I suppose you started from a version of easyconfigs.py from before @boegel added those lines, so you are indeed inadvertently removing them here...

[sassy-crick]

@migueldiascosta yes, that is what happened. I thought it is better to ask what to do instead of making more of a mess.
Thanks for helping here.
However, I am lost why the checks are not working now. It looks like the lines @boegel added are the problem here but then I might be wrong.
:-(

[migueldiascosta]

@sassy-crick sassy-crick#7 should fix it

[migueldiascosta]

@boegelbot please test @ generoso

[boegelbot]

@migueldiascosta: Request for testing this PR well received on login1

PR test command 'EB_PR=14305 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_14305 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 7426

Test results coming soon (I hope)...

- notification for comment with ID 985163026 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux rocky linux 8.4, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/bd18357984fcbcd2e44c78f6ca623c3e for a full test report.

[migueldiascosta]

lgtm

[migueldiascosta]

Going in, thanks @sassy-crick!