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make Autoconf a build dep for tRNAscan-SE + add missing Perl dependency #18680

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boegel
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@boegel boegel commented Aug 29, 2023

(created using eb --new-pr)

@boegel boegel added the bug fix label Aug 29, 2023
@boegel boegel added this to the next release (4.8.1?) milestone Aug 29, 2023
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boegel commented Aug 29, 2023

@boegelbot please test @ generoso

@boegel boegel requested a review from verdurin August 29, 2023 13:39
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@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=18680 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_18680 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 11574

Test results coming soon (I hope)...

- notification for comment with ID 1697466508 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegel commented Aug 29, 2023

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3102.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/76a0f69006e26d845d525c3266027001 for a full test report.

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Test report by @verdurin
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/c78bd896fdfc2af62e526f4edcb3dbfe for a full test report.

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/e33fded9fbd6cead7bc4f09f4d12e5d9 for a full test report.

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verdurin commented Aug 29, 2023

@boegelbot please test @ jsc-zen2

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@verdurin: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=18680 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_18680 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3267

Test results coming soon (I hope)...

- notification for comment with ID 1697471952 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/bb4ec4f5a385b4d9b527bccd9e739b8f for a full test report.

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Looks fine.

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Going in, thanks @boegel!

@verdurin verdurin merged commit a07d6ae into easybuilders:develop Aug 29, 2023
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@boegel boegel deleted the 20230829153840_new_pr_tRNAscan-SE2012 branch August 30, 2023 12:03
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3 participants