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EcoHealth Alliance

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  1. HP3 HP3 Public

    Repository for Host-Pathogen Phylogeny Project. Paper DOI: 10.1038/nature22975

    HTML 15 6

  2. fasterize fasterize Public

    High performance raster conversion for modern spatial data 🚀🌏▦

    C++ 182 15

  3. diagnostic-dashboard diagnostic-dashboard Public

    GRITS uses natural language processing to extract disease-related information from text, including disease names, symptoms, dates, locations, case and death counts, and more.

    JavaScript 6

  4. flirt flirt Public

    FLIRT uses airline flight schedule data to map the commercial flight network. It shows direct flights from a selected location, and can simulate passengers taking multi-leg itineraries.

    JavaScript 7

  5. eidr-connect eidr-connect Public

    EIDR Connect takes the data extracted by GRITS and structures it to reconstruct disease events as they are reported across different documents.

    CoffeeScript 1

  6. EpiTator EpiTator Public

    EpiTator annotates epidemiological information in text documents. It is the natural language processing framework that powers GRITS and EIDR Connect.

    Python 42 9

Repositories

Showing 10 of 201 repositories
  • ohcleandat Public

    One Health Data Cleaning and Quality Checking Package

    ecohealthalliance/ohcleandat’s past year of commit activity
    R 0 MIT 0 13 1 Updated Aug 27, 2024
  • awesome-parasite Public

    A curated list of host-parasite information

    ecohealthalliance/awesome-parasite’s past year of commit activity
    35 4 10 0 Updated Aug 17, 2024
  • open-rvfcast Public

    Wellcome Open RVFCast project repository

    ecohealthalliance/open-rvfcast’s past year of commit activity
    HTML 0 1 22 1 Updated Aug 12, 2024
  • hotspots2 Public

    This code powers the models for the paper "Global hotspots and correlates of emerging zoonotic diseases".

    ecohealthalliance/hotspots2’s past year of commit activity
    R 5 Apache-2.0 3 0 0 Updated Jun 28, 2024
  • ehallm Public

    What the Package Does (Title Case)

    ecohealthalliance/ehallm’s past year of commit activity
    R 0 0 1 0 Updated Jun 26, 2024
  • eha-ma-handbook Public

    EcoHealth Alliance Modeling & Analytics Handbook

    ecohealthalliance/eha-ma-handbook’s past year of commit activity
    R 4 10 46 0 Updated Jun 19, 2024
  • sabrenetfunctions Public

    Package for some functions for sabrenet data download, cleaning, summarizing, etc used across sabrenet repositories

    ecohealthalliance/sabrenetfunctions’s past year of commit activity
    R 0 0 0 0 Updated Jun 17, 2024
  • slurm-containerized-hpc-environment Public

    The goal of this project is to outline the strategies for integrating Simple Linux Utility for Resource Management(SLURM) into our existing High-Performance Computing(HPC) platform.

    ecohealthalliance/slurm-containerized-hpc-environment’s past year of commit activity
    Shell 0 0 2 0 Updated May 29, 2024
  • ecohealthalliance.r-universe.dev Public

    An R-Universe for EcoHealth Alliance Packages

    ecohealthalliance/ecohealthalliance.r-universe.dev’s past year of commit activity
    1 MIT 0 0 0 Updated Apr 17, 2024
  • slurm-eh-server Public
    ecohealthalliance/slurm-eh-server’s past year of commit activity
    Shell 0 0 0 0 Updated Apr 16, 2024
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