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what is the -s option used for? #11

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SusanaFreitas opened this issue Oct 21, 2019 · 0 comments
Open

what is the -s option used for? #11

SusanaFreitas opened this issue Oct 21, 2019 · 0 comments

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@SusanaFreitas
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Sorry if this was explained somewhere else, but I couldnt find the information anywhere.
I understand the usage of the readgroup, but I don't understand what is the -s for. When adding a new sample name and reagroup (with options -s and -r, respectively), the bam file will only keep the readgroup I added, and no sample name.
So, what does it do?

Thanks!

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