chore: cleanup and update gradle

[sgammon]

Changelog

• chore: upgrade gradle → 8.2.1
• chore: update ktlint → 0.49.x

[codecov]

Codecov Report

Merging #242 (cef9ea9) into v3 (ce39ea3) will increase coverage by 0.05%.
The diff coverage is 72.91%.

@@            Coverage Diff             @@
##               v3     #242      +/-   ##
==========================================
+ Coverage   54.07%   54.12%   +0.05%     
==========================================
  Files         260      260              
  Lines        8807     8824      +17     
  Branches     1269     1260       -9     
==========================================
+ Hits         4762     4776      +14     
- Misses       3651     3656       +5     
+ Partials      394      392       -2     

Flag	Coverage Δ
jvm	54.12% <72.91%> (+0.05%)	⬆️
lib	55.58% <72.91%> (+0.05%)	⬆️
substrate	0.00% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files	Coverage Δ
.../base/src/jvmMain/kotlin/elide/util/RuntimeFlag.kt	44.11% <0.00%> (+17.64%)	⬆️
...kotlin/elide/tool/cli/cmd/repl/ToolShellCommand.kt	5.04% <0.00%> (+0.02%)	⬆️
...in/kotlin/elide/runtime/gvm/cfg/JsRuntimeConfig.kt	27.77% <ø> (ø)
...e/runtime/gvm/internals/vfs/AbstractDelegateVFS.kt	32.70% <71.42%> (ø)
.../gvm/internals/context/NativeContextManagerImpl.kt	53.70% <77.77%> (+2.33%)	⬆️
...kotlin/elide/runtime/gvm/internals/js/JsRuntime.kt	68.70% <80.00%> (+1.26%)	⬆️
...es/cli/src/main/kotlin/elide/tool/cli/ElideTool.kt	32.39% <100.00%> (ø)
...tlin/elide/runtime/gvm/cfg/GuestVMConfiguration.kt	45.45% <100.00%> (+12.12%)	⬆️
...in/elide/runtime/gvm/internals/AbstractVMEngine.kt	26.29% <100.00%> (-0.17%)	⬇️
.../runtime/gvm/internals/vfs/EmbeddedGuestVFSImpl.kt	76.22% <100.00%> (+0.09%)	⬆️

... and 7 files with indirect coverage changes

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