sourmash: init at 4.8.11

recipes/recipes_emscripten/sourmash/build.sh

@@ -0,0 +1,3 @@
+#!/bin/bash
+export MATURIN_PYTHON_SYSCONFIGDATA_DIR=${PREFIX}/etc/conda/_sysconfigdata__emscripten_wasm32-emscripten.py
+${PYTHON} -m pip  install . -vvv

recipes/recipes_emscripten/sourmash/recipe.yaml

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+context:
+  version: '4.8.11'
+  sha256: '1a06a76df464b92685779aaaa6ed02a577bdd73a4ab32972e8134581034d34bf'
+
+package:
+  name: sourmash
+  version: ${{ version }}
+
+source:
+- url: https://pypi.io/packages/source/s/sourmash/sourmash-${{ version }}.tar.gz
+  sha256: ${{ sha256 }}
+
+build:
+  number: 0
+
+requirements:
+  build:
+    - cross-python_${{target_platform}}
+    - cffi == 1.15.1
+    - openssl
+    - rust
+    - maturin
+  host:
+    - python
+    - openssl
+    - cffi ==1.15.1
+  run:
+    - screed >=1.1.2
+    - cffi ==1.15.1
+    - deprecation >=2.0.6
+    - cachetools >=4.2.1,<5
+    - numpy
+    - matplotlib-base
+    - scipy
+    - bitstring >=3.1.9,<4
+
+tests:
+  - script: pytester
+    requirements:
+      build:
+        - pytester
+      run:
+        - pytester-run
+    files:
+      recipe:
+        - test_sourmash.py

recipes/recipes_emscripten/sourmash/test_sourmash.py

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+def test_simple_save_load(selenium):
+    from pathlib import Path
+    from tempfile import TemporaryDirectory
+
+    import sourmash
+
+    mh = sourmash.MinHash(0, 5, scaled=1)
+    mh.add_sequence("ACGTAGGTATAGGATACCTCGCTAGTACGTGCA")
+    ss = sourmash.SourmashSignature(mh, name="foo")
+
+    with TemporaryDirectory() as td:
+        name = Path(td) / "test.sig"
+        with open(name, "w") as fp:
+            sourmash.save_signatures([ss], fp=fp)
+
+        loaded = sourmash.load_one_signature(str(name))
+        assert loaded == ss