Releases: enasequence/webin-cli
Releases · enasequence/webin-cli
8.1.1
8.1.0
8.0.0
Release notes:
- All contexts : Only supports Java 17 and above.
- read context : uses latest tools for file processing.
- read context : bz2 compressed file format is now supported.
- read context : fixes how NOT_AUTCG characters are counted. previously it was per read and not per sample, which was incorrect.
- read context : other improvements and fixes.
7.3.1
Release notes:
- All contexts: Resolved an issue with the taxonomy API, which was causing the following error:
Error while calling the url: http://wwwint.ebi.ac.uk/ena/taxonomy/rest/
7.3.0
Release notes:
- genome, transcriptome and sequence contexts: Support new qualifier /geo_loc_name as a replacement for the /country qualifier. Any /country qualifiers will be automatically converted to /geo_loc_name qualifier.
7.2.1
Release notes:
- genome and sequence contexts: Fixed the following error from being erroneously reported when the feature was 5' partial: Protein coding feature can be a single stop codon only if it has 3 bases and is 5' partial.
- genome and sequence contexts: Fixed a bug where partiality was erroneously rejected when using the order operator
- genome and sequence contexts: Fixed the following error from being erroneously reported: Anticodon amino acid abbreviation "..." is not matching with the sequence "..." using translation table "...".
7.2.0
7.1.1
Release notes:
- assembly, template, sequence context: support 'Czechia' country value in samples and sequence submissions.
7.1.0
7.0.1
Release notes:
- all contexts: Fixed the submission problem where sample retrieval fails with the following error: 'Failed to initialise validator. Could not retrieve BioSample'.
- This error prevents samples from being referenced by BioSample or SRA sample accession in all Webin-CLI 6.* versions and in the Webin-CLI 7.0.0 version.
- This error was introduced 1st of February 2024.