Skip to content

epiviz/efs-genomes

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

7 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

genomes files for epiviz file server

created using the cli script from efs

efs build_genome --ucsc=hg19 --output=./hg19

replace hg19 with other genome builds.

To add the genomes to efs, use type efs-dir

genome = mMgr.add_genome("hg38", url=os.getcwd() + "/genomes/hg38", type = "efs-dir")
genome = mMgr.add_genome("hg19", url=os.getcwd() + "/genomes/hg19", type = "efs-dir")
genome = mMgr.add_genome("mm10", url=os.getcwd() + "/genomes/mm10", type = "efs-dir")
genome = mMgr.add_genome("mm9", url=os.getcwd() + "/genomes/mm9", type = "efs-dir")

About

No description, website, or topics provided.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published