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Achievement: Pull SharkAchievement: YOLO

Achievements

Achievement: Pull SharkAchievement: YOLO

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espositomario/README.md

Hi, I'm Mario 👋

Bioinformatician | 23 y.o.

🌍 About Me

  • 🎓 MSc in Bioinformatics (Univeristy of Bologna) and BSc in Health Biotechnology (University of Naples Federico II)
  • 🚀 Love applying machine learning to real-world biological problems.

Skills

  • 💻 Programming and OS: Python, Bash, R, Linux, MacOS
  • 📈 Modeling: Deep Learning (DNN, CNN, AE, VAE), Machine Learning (SVM, Random Forest, HMM, Regression)
  • 🧬 Bioinformatics: NGS processing and analysis (ChIP-seq, ATAC-seq, RNA-seq, WES-seq), Statistical analysis, Data visualization
  • 🐍 Python Libraries: scikit-learn, Keras, TensorFlow, pandas, SciPy, NumPy, matplotlib, seaborn
  • 🛠️ Other Tools: Anaconda, Docker, Git, PowerPoint, VSCode

Check out my GitHub repositories with academic and personal projects showcasing my work in bioinformatics, deep learning, and NGS analysis.

Interested in my academic experience? Visit my Linkedin for more insights.

LinkedIn

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  1. DeFungi-CNN DeFungi-CNN Public

    Image classification of superficial fungal infections (dermatomycoses) with CNNs and Transfer Learning (EfficientNetV2)

    Jupyter Notebook

  2. profile-HMM-protein-seq profile-HMM-protein-seq Public

    Profile hidden Markov model (HMM) to identify the Kunitz domain in protein sequences, using MSA-guided training and optimization.

    Python 1

  3. CardioDiff-VAE CardioDiff-VAE Public

    Representation learning with Variational Autoencoders to Clusters Genes based on their Expression and Epigenetic Dynamics during Cardiac differentiation

    Jupyter Notebook