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Thank you for reporting this issue. It's not actually related to virtual sites, but was a general bug in the particle removal code that you happened to trigger. This is fixed in #3288.
3288: core: Simplify particle removal r=fweik a=fweik
Fixes#3286.
Description of changes:
- Simplify particle removal by doing one linear pass over all particles
instead using index
Co-authored-by: Florian Weik <fweik@icp.uni-stuttgart.de>
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