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@essigmannlab

Essigmann Lab

Understanding lesions formed in the genome and endpoints of mutation, cancer, and cell death.

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  1. dcs_scripts dcs_scripts Public

    A collection of command line scripts for routine bioinformatics tasks of the Essigmann Lab.

    Python 1 1

  2. COSMIC_data_analysis COSMIC_data_analysis Public

    Python 2

  3. rnaseq rnaseq Public

    Pipeline for RNA-seq scripts used by the Essigmann Lab.

    R 2

  4. NDMA_mutagenesis NDMA_mutagenesis Public

    Collection of pipelines and scripts for data analysis in the "Molecular origins of mutational spectra produced by the environmental carcinogen N-nitrosodimethylamine and SN1 chemotherapeutic agents…

    Python

  5. 5CldC_spectrum 5CldC_spectrum Public

    Collection of scripts for data analysis and visualization for the paper "5-Chloro-2’-deoxycytidine Induces a Distinctive High-Resolution Mutational Spectrum of Transition Mutations in Vivo" by Chan…

    Python

Repositories

Showing 5 of 5 repositories
  • 5CldC_spectrum Public

    Collection of scripts for data analysis and visualization for the paper "5-Chloro-2’-deoxycytidine Induces a Distinctive High-Resolution Mutational Spectrum of Transition Mutations in Vivo" by Chancharoen et al.

    essigmannlab/5CldC_spectrum’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 15, 2023
  • NDMA_mutagenesis Public

    Collection of pipelines and scripts for data analysis in the "Molecular origins of mutational spectra produced by the environmental carcinogen N-nitrosodimethylamine and SN1 chemotherapeutic agents" study by Armijo et al.

    essigmannlab/NDMA_mutagenesis’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 9, 2023
  • dcs_scripts Public

    A collection of command line scripts for routine bioinformatics tasks of the Essigmann Lab.

    essigmannlab/dcs_scripts’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Dec 10, 2018
  • rnaseq Public

    Pipeline for RNA-seq scripts used by the Essigmann Lab.

    essigmannlab/rnaseq’s past year of commit activity
    R 0 2 0 0 Updated Nov 29, 2018
  • COSMIC_data_analysis Public
    essigmannlab/COSMIC_data_analysis’s past year of commit activity
    Python 0 2 0 0 Updated Sep 28, 2018

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