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Change default Rscript #321

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wants to merge 3 commits into from
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Change default Rscript #321

wants to merge 3 commits into from

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MajoroMask
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Do not merge this pull request.

I just want to show after change the default Rscript instead of setting --rlibpath, one can use costomized R environment just for CNVkit.

Little bug in the README.
Switch to another `Rscript`
etal added a commit that referenced this pull request Jun 29, 2018
In 'batch' the --rlibpath option is still supported but now hidden. In
'segment' both options are visible, but the help text suggests
--rscriptpath over --rlibpath. Docs for 'segment' now refer to
--rscriptpath instead of --rlibpath.

After the next release, the --rlibpath option should be suppressed in
'segment', too.
@etal etal closed this Jun 29, 2018
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