This is an example of demultiplexing:
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Install and open an account with Docker
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Go to lerch-a/HaplotypR (https://github.com/lerch-a/HaplotypR) and from here go to Docker image link (https://github.com/colbyford/HaplotypR-Docker)
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Pull the Image to Local Machine and run locally as it is stated in there (it takes sometime to be completed)
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Now be can see the image "haplotypR" is running in our Docker dashboard
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Type "docker container ls" in terminal and under container ID we will have a specific alpha-numeric 12 digits, e.g. "9690b3181e68"
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Now we need to copy from my local machine (the given examples that I will use in my container) by "Copy File to Container" as "docker cp myfile.txt haplotypr:./myfile.txt". From lerch-a/HaplotypR it is the file "exdata" inside of "inst" file. In my given example is going to be as this: First go to my downloads by "cd Downloads" where my example folder is, and then type "docker cp HaplotypR- master/. 9690b3181e68:/home/rstudio"
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Now we are good to go! in Docker dashboard, at the "haplotypR" image, click "open in a new browser"
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From the lerch-a/HaplotypR (https://github.com/lerch-a/HaplotypR) copy and paste all the code since "Run HaplotypR on R command line" and run it, it will take some time (skip the installation process because we have now all the packages that are needed; in a compiled form by Docker)