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Optimize advanceSort() #94

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ihh opened this issue Oct 24, 2018 · 0 comments
Closed

Optimize advanceSort() #94

ihh opened this issue Oct 24, 2018 · 0 comments

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@ihh
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ihh commented Oct 24, 2018

boss --generate-chars N \
 --concat --generate-one ACDEFGHIKLMNQRSTVWY \
 --concat --generate-one ST \
 --concat --generate-one ACDEFGHIKLMNQRSTVWY \
 --eliminate >PS00001.json

boss --counts -v6 \
 --generate-uniform-dna \
 --concat \
  --begin \
   PS00001.json --preset translate --double-strand \
   --concat --generate-uniform-dna \
   --count-copies n \
  --end \
 --accept-csv t/csv/nanopore_test.csv \
 --params data/Ecoli_codon.json
ihh added a commit that referenced this issue Oct 30, 2018
@ihh ihh closed this as completed in e54b44b Oct 31, 2018
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