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pip prod(deps): bump tifffile from 2020.7.4 to 2021.3.17 #449

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@dependabot dependabot bot commented on behalf of github Mar 18, 2021

Bumps tifffile from 2020.7.4 to 2021.3.17.

Changelog

Sourced from tifffile's changelog.

2021.3.17 Pass 4391 tests. Fix regression reading multi-file OME-TIFF with missing files (#72). Fix fsspec ReferenceFileSystem with non-native byte order (#56). 2021.3.16 TIFF is no longer a defended trademark. Add method to export fsspec ReferenceFileSystem from ZarrTiffStore (#56). 2021.3.5 Preliminary support for EER format (#68). Do not warn about unknown compression (#68). 2021.3.4 Fix reading multi-file, multi-series OME-TIFF (#67). Detect ScanImage 2021 files (#46). Shape new version ScanImage series according to metadata (breaking). Remove Description key from TiffFile.scanimage_metadata dict (breaking). Also return ScanImage version from read_scanimage_metadata (breaking). Fix docstrings. 2021.2.26 Squeeze axes of LSM series by default (breaking). Add option to preserve single dimensions when reading from series (WIP). Do not allow appending to OME-TIFF files. Fix reading STK files without name attribute in metadata. Make TIFF constants multi-thread safe and pickleable (#64). Add detection of NDTiffStorage MajorVersion to read_micromanager_metadata. Support ScanImage v4 files in read_scanimage_metadata. 2021.2.1 Fix multi-threaded access of ZarrTiffStores using same TiffFile instance. Use fallback zlib and lzma codecs with imagecodecs lite builds. Open Olympus and Panasonic RAW files for parsing, albeit not supported. Support X2 and X4 differencing found in DNG. Support reading JPEG_LOSSY compression found in DNG. 2021.1.14 Try ImageJ series if OME series fails (#54) Add option to use pages as chunks in ZarrFileStore (experimental). Fix reading from file objects with no readinto function. 2021.1.11 Fix test errors on PyPy. Fix decoding bitorder with imagecodecs >= 2021.1.11. 2021.1.8 Decode float24 using imagecodecs >= 2021.1.8. Consolidate reading of segments if possible. 2020.12.8 Fix corrupted ImageDescription in multi shaped series if buffer too small. Fix libtiff warning that ImageDescription contains null byte in value. Fix reading invalid files using JPEG compression with palette colorspace. 2020.12.4 Fix reading some JPEG compressed CFA images. Make index of SubIFDs a tuple. Pass through FileSequence.imread arguments in imread. Do not apply regex flags to FileSequence axes patterns (breaking).

... (truncated)

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@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Mar 18, 2021
@dependabot dependabot bot requested review from pcutillas and smalbadger March 18, 2021 05:08
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dependabot bot commented on behalf of github Apr 1, 2021

Superseded by #461.

@dependabot dependabot bot closed this Apr 1, 2021
@dependabot dependabot bot deleted the dependabot/pip/tifffile-2021.3.17 branch April 1, 2021 05:15
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