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Removing dependency on args being in alphabetical order. (#507)
* Removing dependency on args being in alphabetical order. Previously, arg parser would display the arguments in the help section in alphabetical order. Since we're now moving in the direction of grouping arguments by functionality independent of names (like for upcoming --gitignore flag), we now have to come up with a quick refactoring that allows arguments to be displayed in a specified order regardless of what alphabetical order the arguments themselves occupy. * Changing sorting code per PR comment
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