singlecell_functions

This is a team work from the Zhang lab:

• Create generalized functions to be used to analyze different single-cell datasets.
• Implement Machine learning and statistical modeling code for single-cell omics data analysis and integration.
• Share tutorial code for single-cell QC, visualization, etc

Here we just illustrate several:

• ⭐ Single-cell doublet detection
• ⭐ Single-cell TCR analysis, take CD8 T cell TCR as an example
• ⭐ Tutorial of single-cell RNA-seq analytical pipeline
• ⭐ CITEs-seq QC and downstream analysis
• ⭐ Mixed effect modeling on associating single-cell data with synovial phenotypes

We are adding more functions to this repository and stay tuned 🔥