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BamToFastq tool help

BamToFastq (0.1-420-g3536bb0)

Converts a coordinate-sorted BAM file to FASTQ files (paired-end only).

Mandatory parameters:
  -in <file>   Input BAM file.
  -out1 <file> Read 1 output FASTQ.GZ file.
  -out2 <file> Read 2 output FASTQ.GZ file.

Special parameters:
  --help       Shows this help and exits.
  --version    Prints version and exits.
  --changelog  Prints changeloge and exits.
  --tdx        Writes a Tool Definition Xml file. The file name is the application name with the suffix '.tdx'.

BamToFastq changelog

BamToFastq 0.1-420-g3536bb0

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