CLEANUP: Extract internal, generic progress_notify() #130
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on: [push, pull_request] | |
name: revdepcheck-top | |
jobs: | |
R-CMD-check: | |
if: "! contains(github.event.head_commit.message, '[ci skip]')" | |
timeout-minutes: 30 | |
runs-on: ubuntu-latest | |
name: ${{ matrix.config.pkg }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- { r: "release", pkg: "cSEM" } | |
- { r: "release", pkg: "dipsaus" } | |
- { r: "release", pkg: "EFAtools" } | |
# - { r: "release", pkg: "EGAnet" } ## libglpk.so missing | |
# - { r: "release", pkg: "elevatr" } ## libproj.so missing | |
- { r: "release", pkg: "fabletools" } | |
- { r: "release", pkg: "fxTWAPLS" } | |
# - { r: "release", pkg: "lava" } ## req's Bioc pkgs | |
# - { r: "release", pkg: "nflfastR" } | |
# - { r: "release", pkg: "poppr" } ## fails to install | |
# - { r: "release", pkg: "Seurat" } | |
- { r: "release", pkg: "SimDesign" } | |
# - { r: "release", pkg: "tidySEM" } ## fails to install | |
- { r: "release", pkg: "tsdistributions" } | |
- { r: "release", pkg: "tsgarch" } | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
## R CMD check | |
_R_CHECK_LENGTH_1_CONDITION_: true | |
_R_CHECK_LENGTH_1_LOGIC2_: true | |
_R_CHECK_MATRIX_DATA_: true | |
_R_CHECK_CRAN_INCOMING_: false | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-tinytex@v2 | |
- name: Install system dependencies (Linux) | |
if: runner.os == 'Linux' | |
run: sudo apt-get install -y tidy | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: | | |
any::rcmdcheck | |
any::remotes | |
any::sessioninfo | |
any::covr | |
needs: check | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
install.packages(".", repos=NULL, type="source") | |
install.packages("${{ matrix.config.pkg }}", dependencies=TRUE) | |
shell: Rscript {0} | |
- name: Session info | |
run: | | |
options(width = 100) | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
shell: Rscript {0} | |
- name: Check reverse dependency package | |
run: | | |
url=$(Rscript -e "cat(remotes:::download_version_url('${{ matrix.config.pkg }}', version=NULL, repos='https://cloud.r-project.org', type='source'))") | |
wget "$url" | |
R_PROGRESSR_ENABLE=true | |
R CMD check --no-manual --as-cran "$(basename "$url")" | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@v3 | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-revdep${{ matrix.config.pkg }}-results | |
path: ${{ matrix.config.pkg }}.Rcheck |