Transfer GitHub repo HenrikBengtsson/progressr to futureverse/progressr

.github/workflows/R-CMD-check.yaml

@@ -38,8 +38,6 @@ jobs:
       LANGUAGE: ${{ matrix.config.language }}
       ## R CMD check
       _R_CHECK_CRAN_INCOMING_: false
-      _R_CHECK_LENGTH_1_CONDITION_: true
-      _R_CHECK_LENGTH_1_LOGIC2_: true
       _R_CHECK_MATRIX_DATA_: true
       _R_CHECK_SUGGESTS_ONLY_: true
       _R_CHECK_THINGS_IN_TEMP_DIR_: true

.github/workflows/test-coverage.yaml

@@ -0,0 +1,56 @@
+on: [push]
+
+name: test-coverage.yaml
+
+permissions: read-all
+
+jobs:
+  test-coverage:
+    runs-on: ubuntu-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Assert CODECOV_TOKEN is set
+        run: |
+          if [[ -z "${{secrets.CODECOV_TOKEN}}" ]]; then
+            >&2 echo "::error::ERROR: 'secrets.CODECOV_TOKEN' not set"
+            exit 1
+          fi
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::covr, any::xml2
+          needs: coverage
+
+      - name: Test coverage
+        run: |
+          cov <- covr::package_coverage(
+            quiet = FALSE,
+            clean = FALSE,
+            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
+          )
+          print(cov)
+          covr::to_cobertura(cov)
+        shell: Rscript {0}
+
+      - uses: codecov/codecov-action@v4
+        with:
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}
+
+      - name: Upload test results
+        if: failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: coverage-test-failures
+          path: ${{ runner.temp }}/package

CONTRIBUTING.md

@@ -1,8 +1,8 @@
 
 # Contributing to the 'progressr' package
 
-This Git repository uses the [Git Flow](https://nvie.com/posts/a-successful-git-branching-model/) branching model (the [`git flow`](https://github.com/petervanderdoes/gitflow-avh) extension is useful for this).  The [`develop`](https://github.com/HenrikBengtsson/progressr/tree/develop) branch contains the latest contributions and other code that will appear in the next release, and the [`master`](https://github.com/HenrikBengtsson/progressr) branch contains the code of the latest release, which is exactly what is currently on [CRAN](https://cran.r-project.org/package=progressr).
+This Git repository uses the [Git Flow](https://nvie.com/posts/a-successful-git-branching-model/) branching model (the [`git flow`](https://github.com/petervanderdoes/gitflow-avh) extension is useful for this).  The [`develop`](https://github.com/futureverse/progressr/tree/develop) branch contains the latest contributions and other code that will appear in the next release, and the [`master`](https://github.com/futureverse/progressr) branch contains the code of the latest release, which is exactly what is currently on [CRAN](https://cran.r-project.org/package=progressr).
 
-Contributing to this package is easy.  Just send a [pull request](https://help.github.com/articles/using-pull-requests/).  When you send your PR, make sure `develop` is the destination branch on the [progressr repository](https://github.com/HenrikBengtsson/progressr).  Your PR should pass `R CMD check --as-cran`, which will also be checked by  <a href="https://github.com/HenrikBengtsson/progressr/actions?query=workflow%3AR-CMD-check">GitHub Actions</a> and  when the PR is submitted.
+Contributing to this package is easy.  Just send a [pull request](https://help.github.com/articles/using-pull-requests/).  When you send your PR, make sure `develop` is the destination branch on the [progressr repository](https://github.com/futureverse/progressr).  Your PR should pass `R CMD check --as-cran`, which will also be checked by  <a href="https://github.com/futureverse/progressr/actions?query=workflow%3AR-CMD-check">GitHub Actions</a> and  when the PR is submitted.
 
 We abide to the [Code of Conduct](https://www.contributor-covenant.org/version/2/0/code_of_conduct/) of Contributor Covenant.

DESCRIPTION

@@ -1,5 +1,5 @@
 Package: progressr
-Version: 0.14.0-9008
+Version: 0.14.0-9009
 Title: An Inclusive, Unifying API for Progress Updates
 Description: A minimal, unifying API for scripts and packages to report progress updates from anywhere including when using parallel processing.  The package is designed such that the developer can to focus on what progress should be reported on without having to worry about how to present it.  The end user has full control of how, where, and when to render these progress updates, e.g. in the terminal using utils::txtProgressBar(), cli::cli_progress_bar(), in a graphical user interface using utils::winProgressBar(), tcltk::tkProgressBar() or shiny::withProgress(), via the speakers using beepr::beep(), or on a file system via the size of a file. Anyone can add additional, customized, progression handlers. The 'progressr' package uses R's condition framework for signaling progress updated. Because of this, progress can be reported from almost anywhere in R, e.g. from classical for and while loops, from map-reduce API:s like the lapply() family of functions, 'purrr', 'plyr', and 'foreach'. It will also work with parallel processing via the 'future' framework, e.g. future.apply::future_lapply(), furrr::future_map(), and 'foreach' with 'doFuture'. The package is compatible with Shiny applications.
 Authors@R: c(person("Henrik", "Bengtsson",
@@ -34,7 +34,7 @@ Suggests:
     base64enc,
     tools
 VignetteBuilder: progressr
-URL: https://progressr.futureverse.org, https://github.com/HenrikBengtsson/progressr
-BugReports: https://github.com/HenrikBengtsson/progressr/issues
+URL: https://progressr.futureverse.org, https://github.com/futureverse/progressr
+BugReports: https://github.com/futureverse/progressr/issues
 RoxygenNote: 7.3.2
 Roxygen: list(markdown = TRUE)

R/handler_filesize.R

@@ -27,7 +27,7 @@
 handler_filesize <- function(file = "default.progress", intrusiveness = getOption("progressr.intrusiveness.file", 5), target = "file", enable = getOption("progressr.enable", TRUE), ...) {
   reporter <- local({
     set_file_size <- function(config, state, progression, message = state$message) {
-      ## Troubleshoot https://github.com/HenrikBengtsson/progressr/issues/168
+      ## Troubleshoot https://github.com/futureverse/progressr/issues/168
       stop_if_not(
         length(config$max_steps) == 1L, is.numeric(config$max_steps),
         !is.na(config$max_steps), is.finite(config$max_steps),

README.md

@@ -1,7 +1,7 @@
 
 
 <div id="badges"><!-- pkgdown markup -->
-<a href="https://CRAN.R-project.org/web/checks/check_results_progressr.html"><img border="0" src="https://www.r-pkg.org/badges/version/progressr" alt="CRAN check status"/></a> <a href="https://github.com/HenrikBengtsson/progressr/actions?query=workflow%3AR-CMD-check"><img border="0" src="https://github.com/HenrikBengtsson/progressr/actions/workflows/R-CMD-check.yaml/badge.svg?branch=develop" alt="R CMD check status"/></a> <a href="https://github.com/HenrikBengtsson/progressr/actions?query=workflow%3Arevdepcheck-top"><img border="0" src="https://github.com/HenrikBengtsson/progressr/actions/workflows/revdepcheck-top.yaml/badge.svg?branch=develop" alt="Top reverse-dependency checks status"/></a>    <a href="https://app.codecov.io/gh/HenrikBengtsson/progressr"><img border="0" src="https://codecov.io/gh/HenrikBengtsson/progressr/branch/develop/graph/badge.svg" alt="Coverage Status"/></a> <a href="https://lifecycle.r-lib.org/articles/stages.html"><img border="0" src="man/figures/lifecycle-maturing-blue.svg" alt="Life cycle: maturing"/></a>
+<a href="https://CRAN.R-project.org/web/checks/check_results_progressr.html"><img border="0" src="https://www.r-pkg.org/badges/version/progressr" alt="CRAN check status"/></a> <a href="https://github.com/futureverse/progressr/actions?query=workflow%3AR-CMD-check"><img border="0" src="https://github.com/futureverse/progressr/actions/workflows/R-CMD-check.yaml/badge.svg?branch=develop" alt="R CMD check status"/></a> <a href="https://github.com/futureverse/progressr/actions?query=workflow%3Arevdepcheck-top"><img border="0" src="https://github.com/futureverse/progressr/actions/workflows/revdepcheck-top.yaml/badge.svg?branch=develop" alt="Top reverse-dependency checks status"/></a>    <a href="https://app.codecov.io/gh/futureverse/progressr"><img border="0" src="https://codecov.io/gh/futureverse/progressr/branch/develop/graph/badge.svg" alt="Coverage Status"/></a> <a href="https://lifecycle.r-lib.org/articles/stages.html"><img border="0" src="man/figures/lifecycle-maturing-blue.svg" alt="Life cycle: maturing"/></a>
 </div>
 
 # progressr: An Inclusive, Unifying API for Progress Updates 
@@ -874,7 +874,7 @@ depends on it.  The roadmap for developing the API is roughly:
       additional progression handlers
 
 For a more up-to-date view on what features might be added, see
-<https://github.com/HenrikBengtsson/progressr/issues>.
+<https://github.com/futureverse/progressr/issues>.
 
 
 ## Appendix
@@ -1054,7 +1054,7 @@ install.packages("progressr")
 
 To install the pre-release version that is available in Git branch `develop` on GitHub, use:
 ```r
-remotes::install_github("HenrikBengtsson/progressr", ref="develop")
+remotes::install_github("futureverse/progressr", ref="develop")
 ```
 This will install the package from source.  
 

incl/OVERVIEW.md

@@ -866,7 +866,7 @@ depends on it.  The roadmap for developing the API is roughly:
       additional progression handlers
 
 For a more up-to-date view on what features might be added, see
-<https://github.com/HenrikBengtsson/progressr/issues>.
+<https://github.com/futureverse/progressr/issues>.
 
 
 ## Appendix

pkgdown/_pkgdown.yml

@@ -3,7 +3,7 @@ url: https://progressr.futureverse.org
 home:
   links:
   - text: Roadmap/Milestones
-    href: https://github.com/HenrikBengtsson/progressr/milestones
+    href: https://github.com/futureverse/progressr/milestones
   - text: The Futureverse Project
     href: https://www.futureverse.org/
   - text: Futureverse User Forum

vignettes/progressr-intro.md

@@ -877,7 +877,7 @@ depends on it.  The roadmap for developing the API is roughly:
       additional progression handlers
 
 For a more up-to-date view on what features might be added, see
-<https://github.com/HenrikBengtsson/progressr/issues>.
+<https://github.com/futureverse/progressr/issues>.
 
 
 ## Appendix