Update the condor testing to use the latest version #1611
Workflow file for this run
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name: CI Push Testing | |
on: | |
pull_request_target: | |
branches: [ develop ] | |
jobs: | |
approve: | |
name: Approval | |
if: ${{github.event.pull_request.head.repo.full_name != 'ganga-devs/ganga'}} | |
runs-on: ubuntu-latest | |
environment: | |
name: Integrate Pull Request | |
steps: | |
- name: Approve | |
run: echo For security reasons, all pull requests need to be approved first before running any automated CI. | |
lint: | |
name: Linting | |
runs-on: ubuntu-latest | |
needs: [approve] | |
if: always() && !failure() && !cancelled() | |
continue-on-error: true | |
outputs: | |
files_to_lint: ${{ steps.flake8.outputs.files_to_lint }} | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
fetch-depth: 0 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v1 | |
with: | |
python-version: 3.11 | |
- name: Get changed files | |
id: changed-files | |
uses: tj-actions/changed-files@v40.2.0 | |
with: | |
base_sha: ${{ github.event.pull_request.head.sha }} | |
- name: Install dependencies | |
run: | | |
python3 -m pip install --upgrade pip setuptools wheel | |
python3 -m pip install flake8 | |
- name: Setup flake8 annotations | |
if: startsWith(github.head_ref, 'autopep8-patches') | |
uses: rbialon/flake8-annotations@v1 | |
- name: Lint with flake8 | |
id: flake8 | |
run: | | |
files_to_lint="" | |
count=0 | |
for file in ${{ steps.changed-files.outputs.all_changed_files }}; do | |
if [[ $file == *.py ]]; then | |
linting_output=`flake8 --count --exit-zero $file` | |
count=`echo "$linting_output" | tail -1` | |
if [[ $count > 0 ]]; then | |
files_to_lint="$files_to_lint $file" | |
echo "$linting_output" | |
fi | |
fi | |
done | |
echo "files_to_lint=$files_to_lint" >> $GITHUB_OUTPUT | |
- name: Fail on linting violations | |
if: steps.flake8.outputs.files_to_lint != '' | |
run: exit 1 | |
autofix_pr: | |
name: Create autopep8 PR | |
if: always() && !failure() && !cancelled() && startsWith(github.head_ref, 'autopep8-patches') == false && needs.lint.outputs.files_to_lint != '' | |
runs-on: ubuntu-latest | |
needs: lint | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Run autopep8 | |
id: autopep8 | |
uses: peter-evans/autopep8@v2.0.0 | |
with: | |
args: --exit-code --recursive --in-place --aggressive --aggressive ${{ needs.lint.outputs.files_to_lint }} | |
- name: Set autopep8 branch name | |
id: vars | |
run: | | |
echo "branch-name=autopep8-patches/${{ github.head_ref }}" >> $GITHUB_OUTPUT | |
PR_NUMBER=`echo ${{ github.event.pull_request.number }} | cut -f 1 -d '/'` | |
echo "pr-number=$PR_NUMBER" >> $GITHUB_OUTPUT | |
- name: Create Pull Request | |
if: steps.autopep8.outputs.exit-code == 2 | |
uses: peter-evans/create-pull-request@v5.0.2 | |
with: | |
commit-message: autopep8 action fixes | |
title: "PEP8 fixes for PR #${{ github.event.pull_request.number }} (${{ github.head_ref }}) by autopep8" | |
body: This is an auto-generated PR with fixes by autopep8 for the ${{ github.head_ref }} branch. | |
labels: autopep8, automated pr | |
branch: "autopep8-patches/${{ github.head_ref }}" | |
base: ${{ github.base_ref }} | |
token: ${{ secrets.WORKFLOW }} | |
core-unit: | |
name: GangaCore Unit | |
needs: lint | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
fetch-depth: 0 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v1 | |
with: | |
python-version: 3.11 | |
- name: Install dependencies | |
run: | | |
python -m venv ~/venv | |
. ~/venv/bin/activate | |
python -m pip install --upgrade pip setuptools wheel | |
python -m pip install -e .[dev] | |
- name: Test with pytest | |
run: | | |
. ~/venv/bin/activate | |
python -m pytest --cov-report term-missing --cov ganga/GangaCore/Core --cov ganga/GangaCore/GPI --cov ganga/GangaCore/GPIDev --cov ganga/GangaCore/Lib --cov ganga/GangaCore/Runtime --cov ganga/GangaCore/PACKAGE.py --cov ganga/GangaCore/Utility --cov ganga/GangaCore/__init__.py ganga/GangaCore/test/Unit | |
core-integration: | |
name: GangaCore Integration | |
needs: core-unit | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
fetch-depth: 0 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v1 | |
with: | |
python-version: 3.11 | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip setuptools wheel | |
python -m pip install -e .[dev] | |
- name: Test with pytest | |
run: python -m pytest --cov-report term-missing --cov ganga/GangaCore/Core --cov ganga/GangaCore/GPI --cov ganga/GangaCore/GPIDev --cov ganga/GangaCore/Lib --cov ganga/GangaCore/Runtime --cov ganga/GangaCore/PACKAGE.py --cov ganga/GangaCore/Utility --cov ganga/GangaCore/__init__.py ganga/GangaCore/test/GPI | |
gui: | |
name: GangaGUI tests | |
needs: lint | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
fetch-depth: 0 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v1 | |
with: | |
python-version: 3.11 | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip setuptools wheel | |
python -m pip install -e .[dev] | |
- name: Test with pytest | |
run: python -m pytest --cov-report term-missing --cov ganga/GangaGUI ganga/GangaGUI/test | |
condor: | |
name: Condor | |
needs: lint | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
container: htcondor/mini | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Set up Python 3 | |
run: | | |
dnf install -y python3.11 | |
- name: Install dependencies | |
run: | | |
/usr/bin/python3.11 -m pip install --upgrade pip setuptools wheel | |
/usr/bin/python3.11 -m pip install -e .[dev] | |
- name: Start Condor | |
run: | | |
/start.sh > start.stdout & | |
sleep 30 | |
condor_status | |
- name: Test with pytest | |
run: | | |
pwd | |
find . -exec chown submituser:submituser {} \; | |
su submituser -s /usr/bin/python3.11 -- -m pytest --cov-report term-missing --cov ganga/GangaCore/Lib/Condor ganga/GangaCore/test/Condor | |
condor_status | |
condor_q | |
dirac-unit: | |
name: GangaDirac Unit | |
needs: lint | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
container: centos:7 | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Set up Python 3 | |
run: | | |
yum install -y centos-release-scl-rh | |
yum install -y rh-python38-python rh-python38-python-pip | |
- name: Install dependencies | |
run: | | |
/opt/rh/rh-python38/root/usr/bin/python -m pip install --upgrade pip setuptools wheel | |
/opt/rh/rh-python38/root/usr/bin/python -m pip install -e .[dev] | |
- name: Install Robot certificate | |
env: # Or as an environment variable | |
ROBOT_CERT: ${{ secrets.GangaRobot_UserCert }} | |
ROBOT_KEY: ${{ secrets.GangaRobot_UserKey }} | |
run: | | |
mkdir ~/.globus | |
echo "$ROBOT_CERT" > ~/.globus/usercert.pem | |
echo "$ROBOT_KEY" > ~/.globus/userkey.pem | |
chmod 644 ~/.globus/usercert.pem | |
chmod 400 ~/.globus/userkey.pem | |
- name: Install DIRAC UI | |
run: | | |
yum install -y git wget which | |
mkdir ~/dirac_ui | |
cd ~/dirac_ui | |
wget -np -O dirac-install https://raw.githubusercontent.com/DIRACGrid/management/master/dirac-install.py | |
chmod u+x dirac-install | |
DIRAC_VERSION=`curl -s https://raw.githubusercontent.com/DIRACGrid/DIRAC/integration/release.notes | grep -oP "\\[\\Kv[7-8]r.*[^\\]]" | grep -m1 -v -e "pre"` | |
./dirac-install -r $DIRAC_VERSION -i 27 -g v14r1 | |
source ~/dirac_ui/bashrc | |
mkdir ~/.proxy | |
DIRAC_PROXY_INIT=`which dirac-proxy-init` | |
export PATH=~/.proxy:"$PATH" | |
printf '#!/bin/sh\necho abcd | '"$DIRAC_PROXY_INIT"' -p $@ \n' > ~/.proxy/dirac-proxy-init | |
chmod +x ~/.proxy/dirac-proxy-init | |
dirac-proxy-init -x | |
dirac-configure -F -S GridPP -C dips://dirac01.grid.hep.ph.ic.ac.uk:9135/Configuration/Server -I | |
dirac-proxy-init -g gridpp_user -M | |
- name: Test with pytest | |
run: | | |
/opt/rh/rh-python38/root/usr/bin/python -m pytest --cov-report term-missing --cov ganga/GangaDirac ganga/GangaDirac/test/Unit | |
dirac-integration: | |
name: GangaDirac Integration | |
needs: dirac-unit | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
container: centos:7 | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Set up Python 3 | |
run: | | |
yum install -y centos-release-scl-rh | |
yum install -y rh-python38-python rh-python38-python-pip | |
- name: Install dependencies | |
run: | | |
/opt/rh/rh-python38/root/usr/bin/python -m pip install --upgrade pip setuptools wheel | |
/opt/rh/rh-python38/root/usr/bin/python -m pip install -e .[dev] | |
- name: Install Robot certificate | |
env: # Or as an environment variable | |
ROBOT_CERT: ${{ secrets.GangaRobot_UserCert }} | |
ROBOT_KEY: ${{ secrets.GangaRobot_UserKey }} | |
run: | | |
mkdir ~/.globus | |
echo "$ROBOT_CERT" > ~/.globus/usercert.pem | |
echo "$ROBOT_KEY" > ~/.globus/userkey.pem | |
chmod 644 ~/.globus/usercert.pem | |
chmod 400 ~/.globus/userkey.pem | |
- name: Install DIRAC UI | |
run: | | |
yum install -y git wget which | |
mkdir ~/dirac_ui | |
cd ~/dirac_ui | |
wget -np -O dirac-install https://raw.githubusercontent.com/DIRACGrid/management/master/dirac-install.py | |
chmod u+x dirac-install | |
DIRAC_VERSION=`curl -s https://raw.githubusercontent.com/DIRACGrid/DIRAC/integration/release.notes | grep -oP "\\[\\Kv[7]r.*[^\\]]" | grep -m1 -v -e "pre"` | |
DIRAC_VERSION=v7r2p10 | |
./dirac-install -r $DIRAC_VERSION -i 27 -g v14r1 | |
source ~/dirac_ui/bashrc | |
mkdir ~/.proxy | |
DIRAC_PROXY_INIT=`which dirac-proxy-init` | |
export PATH=~/.proxy:"$PATH" | |
printf '#!/bin/sh\necho abcd | '"$DIRAC_PROXY_INIT"' -p $@ \n' > ~/.proxy/dirac-proxy-init | |
chmod +x ~/.proxy/dirac-proxy-init | |
dirac-proxy-init -x | |
dirac-configure -F -S GridPP -C dips://dirac01.grid.hep.ph.ic.ac.uk:9135/Configuration/Server -I | |
dirac-proxy-init -g gridpp_user -M | |
- name: Install gangarc file | |
run: | | |
echo -e "[DIRAC]\nDiracEnvSource = ~/dirac_ui/bashrc" > ~/.gangarc | |
echo -e "[Configuration]\nRUNTIME_PATH=GangaDirac" >> ~/.gangarc | |
echo -e "[defaults_DiracProxy]\ngroup=gridpp_user\nencodeDefaultProxyFileName=False" >> ~/.gangarc | |
- name: Test with pytest | |
env: | |
GANGA_CONFIG_FILE: ~/.gangarc | |
GANGA_CONFIG_PATH: GangaDirac/Dirac.ini | |
DIRAC_DEPRECATED_FAIL: True | |
run: /opt/rh/rh-python38/root/usr/bin/python -m pytest --cov-report term-missing --cov ganga/GangaDirac ganga/GangaDirac/test/GPI | |
lhcb-unit: | |
name: GangaLHCb Unit | |
needs: lint | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
container: | |
image: centos:7 | |
options: --privileged | |
steps: | |
- name: Install CVM-FS | |
run: | | |
yum install -y https://ecsft.cern.ch/dist/cvmfs/cvmfs-release/cvmfs-release-latest.noarch.rpm | |
yum install -y cvmfs cvmfs-config-default | |
cvmfs_config setup | |
echo "CVMFS_REPOSITORIES=lhcb.cern.ch,sft.cern.ch" > /etc/cvmfs/default.local | |
echo "CVMFS_HTTP_PROXY=DIRECT" >> /etc/cvmfs/default.local | |
mkdir -p /cvmfs/lhcb.cern.ch | |
mkdir -p /cvmfs/sft.cern.ch | |
mount -t cvmfs lhcb.cern.ch /cvmfs/lhcb.cern.ch | |
mount -t cvmfs sft.cern.ch /cvmfs/sft.cern.ch | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Install virtualenv and dependencies | |
run: | | |
/cvmfs/sft.cern.ch/lcg/releases/LCG_100/Python/3.8.6/x86_64-centos7-gcc9-opt/bin/python3 -m venv ~/venv | |
. ~/venv/bin/activate | |
python3 -m pip install --upgrade pip setuptools wheel | |
python3 -m pip install -e .[dev,LHCb] | |
- name: Test with pytest | |
run: | | |
. ~/venv/bin/activate | |
python3 -m pytest --cov-report term-missing --cov ganga/GangaLHCb ganga/GangaLHCb/test/Unit | |
lhcb-integration: | |
name: GangaLHCb Integration | |
needs: lhcb-unit | |
if: always() && !failure() && !cancelled() | |
runs-on: ubuntu-latest | |
container: | |
image: centos:7 | |
options: --privileged | |
steps: | |
- name: Install git | |
run: yum install -y git | |
- name: Install CVM-FS | |
run: | | |
yum install -y https://ecsft.cern.ch/dist/cvmfs/cvmfs-release/cvmfs-release-latest.noarch.rpm | |
yum install -y cvmfs cvmfs-config-default | |
cvmfs_config setup | |
echo "CVMFS_REPOSITORIES=lhcb.cern.ch,sft.cern.ch" > /etc/cvmfs/default.local | |
echo "CVMFS_HTTP_PROXY=DIRECT" >> /etc/cvmfs/default.local | |
mkdir -p /cvmfs/lhcb.cern.ch | |
mkdir -p /cvmfs/sft.cern.ch | |
mount -t cvmfs lhcb.cern.ch /cvmfs/lhcb.cern.ch | |
mount -t cvmfs sft.cern.ch /cvmfs/sft.cern.ch | |
- name: Install Robot certificate | |
env: # Or as an environment variable | |
ROBOT_CERT: ${{ secrets.GangaRobot_UserCert }} | |
ROBOT_KEY: ${{ secrets.GangaRobot_UserKey }} | |
run: | | |
mkdir ~/.globus | |
echo "$ROBOT_CERT" > ~/.globus/usercert.pem | |
echo "$ROBOT_KEY" > ~/.globus/userkey.pem | |
chmod 644 ~/.globus/usercert.pem | |
chmod 400 ~/.globus/userkey.pem | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: Install virtualenv and dependencies | |
run: | | |
/cvmfs/sft.cern.ch/lcg/releases/LCG_100/Python/3.8.6/x86_64-centos7-gcc9-opt/bin/python3 -m venv ~/venv | |
. ~/venv/bin/activate | |
python3 -m pip install --upgrade pip setuptools wheel | |
python3 -m pip install -e .[dev,LHCb] | |
- name: Install gangarc file | |
run: | | |
echo -e "[Configuration]\nRUNTIME_PATH=GangaDirac:GangaGaudi:GangaLHCb" > ~/.gangarc | |
- name: Test with pytest | |
env: | |
GANGA_CONFIG_PATH: GangaLHCb/LHCb.ini | |
GANGA_CONFIG_FILE: ~/.gangarc | |
run: | | |
source /cvmfs/lhcb.cern.ch/lib/LbEnv 2>&1 | |
echo abcd | lhcb-proxy-init -p | |
. ~/venv/bin/activate | |
python3 -m pytest --cov-report term-missing --cov ganga/GangaLHCb ganga/GangaLHCb/test/GPI |