Merge branch 'develop' into dependabot/pip/werkzeug-2.2.3

.readthedocs.yaml

@@ -0,0 +1,22 @@
+# .readthedocs.yaml
+# Read the Docs configuration file
+# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
+
+# Required
+version: 2
+
+# Set the version of Python and other tools you might need
+build:
+  os: ubuntu-22.04
+  tools:
+    python: "3.11"
+
+# Build documentation in the docs/ directory with Sphinx
+sphinx:
+  configuration: doc/conf.py
+
+# We recommend specifying your dependencies to enable reproducible builds:
+# https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html
+# python:
+#   install:
+#   - requirements: docs/requirements.txt

README.rst

@@ -34,4 +34,4 @@ to create a simple local job which runs an executable which simply prints some t
 Documentation
 -------------
 
-[User guide and developer documentation](https://ganga.readthedocs.io/en/latest/index.html)
+`User guide and developer documentation <https://ganga.readthedocs.io/en/latest/index.html>`_

doc/conf.py

@@ -32,7 +32,7 @@
 # -- General configuration ------------------------------------------------
 
 # If your documentation needs a minimal Sphinx version, state it here.
-#needs_sphinx = '1.0'
+# needs_sphinx = '1.0'
 
 # Add any Sphinx extension module names here, as strings. They can be
 # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
@@ -53,14 +53,14 @@
 source_suffix = '.rst'
 
 # The encoding of source files.
-#source_encoding = 'utf-8-sig'
+# source_encoding = 'utf-8-sig'
 
 # The master toctree document.
 master_doc = 'index'
 
 # General information about the project.
 project = u'Ganga'
-copyright = u'2016, Ganga Developers'
+copyright = u'2023, Ganga Developers'
 author = u'Ganga Developers'
 
 from GangaCore import _gangaVersion
@@ -83,37 +83,37 @@
 
 # There are two options for replacing |today|: either, you set today to some
 # non-false value, then it is used:
-#today = ''
+# today = ''
 # Else, today_fmt is used as the format for a strftime call.
-#today_fmt = '%B %d, %Y'
+# today_fmt = '%B %d, %Y'
 
 # List of patterns, relative to source directory, that match files and
 # directories to ignore when looking for source files.
 exclude_patterns = ['_build']
 
 # The reST default role (used for this markup: `text`) to use for all
 # documents.
-#default_role = None
+# default_role = None
 
 # If true, '()' will be appended to :func: etc. cross-reference text.
-#add_function_parentheses = True
+# add_function_parentheses = True
 
 # If true, the current module name will be prepended to all description
 # unit titles (such as .. function::).
-#add_module_names = True
+# add_module_names = True
 
 # If true, sectionauthor and moduleauthor directives will be shown in the
 # output. They are ignored by default.
-#show_authors = False
+# show_authors = False
 
 # The name of the Pygments (syntax highlighting) style to use.
 pygments_style = 'sphinx'
 
 # A list of ignored prefixes for module index sorting.
-#modindex_common_prefix = []
+# modindex_common_prefix = []
 
 # If true, keep warnings as "system message" paragraphs in the built documents.
-#keep_warnings = False
+# keep_warnings = False
 
 # If true, `todo` and `todoList` produce output, else they produce nothing.
 todo_include_todos = False
@@ -134,14 +134,14 @@
 }
 
 # Add any paths that contain custom themes here, relative to this directory.
-#html_theme_path = []
+# html_theme_path = []
 
 # The name for this set of Sphinx documents.  If None, it defaults to
 # "<project> v<release> documentation".
-#html_title = None
+# html_title = None
 
 # A shorter title for the navigation bar.  Default is the same as html_title.
-#html_short_title = None
+# html_short_title = None
 
 # The name of an image file (relative to this directory) to place at the top
 # of the sidebar.
@@ -160,80 +160,80 @@
 # Add any extra paths that contain custom files (such as robots.txt or
 # .htaccess) here, relative to this directory. These files are copied
 # directly to the root of the documentation.
-#html_extra_path = []
+# html_extra_path = []
 
 # If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
 # using the given strftime format.
-#html_last_updated_fmt = '%b %d, %Y'
+# html_last_updated_fmt = '%b %d, %Y'
 
 # If true, SmartyPants will be used to convert quotes and dashes to
 # typographically correct entities.
-#html_use_smartypants = True
+# html_use_smartypants = True
 
 # Custom sidebar templates, maps document names to template names.
-#html_sidebars = {}
+# html_sidebars = {}
 
 # Additional templates that should be rendered to pages, maps page names to
 # template names.
-#html_additional_pages = {}
+# html_additional_pages = {}
 
 # If false, no module index is generated.
-#html_domain_indices = True
+# html_domain_indices = True
 
 # If false, no index is generated.
-#html_use_index = True
+# html_use_index = True
 
 # If true, the index is split into individual pages for each letter.
-#html_split_index = False
+# html_split_index = False
 
 # If true, links to the reST sources are added to the pages.
-#html_show_sourcelink = True
+# html_show_sourcelink = True
 
 # If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
-#html_show_sphinx = True
+# html_show_sphinx = True
 
 # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
-#html_show_copyright = True
+# html_show_copyright = True
 
 # If true, an OpenSearch description file will be output, and all pages will
 # contain a <link> tag referring to it.  The value of this option must be the
 # base URL from which the finished HTML is served.
-#html_use_opensearch = ''
+# html_use_opensearch = ''
 
 # This is the file name suffix for HTML files (e.g. ".xhtml").
-#html_file_suffix = None
+# html_file_suffix = None
 
 # Language to be used for generating the HTML full-text search index.
 # Sphinx supports the following languages:
 #   'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
 #   'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr'
-#html_search_language = 'en'
+# html_search_language = 'en'
 
 # A dictionary with options for the search language support, empty by default.
 # Now only 'ja' uses this config value
-#html_search_options = {'type': 'default'}
+# html_search_options = {'type': 'default'}
 
 # The name of a javascript file (relative to the configuration directory) that
 # implements a search results scorer. If empty, the default will be used.
-#html_search_scorer = 'scorer.js'
+# html_search_scorer = 'scorer.js'
 
 # Output file base name for HTML help builder.
 htmlhelp_basename = 'Gangadoc'
 
 # -- Options for LaTeX output ---------------------------------------------
 
 latex_elements = {
-# The paper size ('letterpaper' or 'a4paper').
-#'papersize': 'letterpaper',
+    # The paper size ('letterpaper' or 'a4paper').
+    # 'papersize': 'letterpaper',
 
-# The font size ('10pt', '11pt' or '12pt').
-#'pointsize': '10pt',
+    # The font size ('10pt', '11pt' or '12pt').
+    # 'pointsize': '10pt',
 
-# Additional stuff for the LaTeX preamble.
-#'preamble': '',
+    # Additional stuff for the LaTeX preamble.
+    # 'preamble': '',
 
-# Latex figure (float) alignment
-#'figure_align': 'htbp',
+    # Latex figure (float) alignment
+    # 'figure_align': 'htbp',
 }
 
 # Grouping the document tree into LaTeX files. List of tuples
@@ -246,23 +246,23 @@
 
 # The name of an image file (relative to this directory) to place at the top of
 # the title page.
-#latex_logo = None
+# latex_logo = None
 
 # For "manual" documents, if this is true, then toplevel headings are parts,
 # not chapters.
-#latex_use_parts = False
+# latex_use_parts = False
 
 # If true, show page references after internal links.
-#latex_show_pagerefs = False
+# latex_show_pagerefs = False
 
 # If true, show URL addresses after external links.
-#latex_show_urls = False
+# latex_show_urls = False
 
 # Documents to append as an appendix to all manuals.
-#latex_appendices = []
+# latex_appendices = []
 
 # If false, no module index is generated.
-#latex_domain_indices = True
+# latex_domain_indices = True
 
 
 # -- Options for manual page output ---------------------------------------
@@ -275,7 +275,7 @@
 ]
 
 # If true, show URL addresses after external links.
-#man_show_urls = False
+# man_show_urls = False
 
 
 # -- Options for Texinfo output -------------------------------------------
@@ -290,16 +290,16 @@
 ]
 
 # Documents to append as an appendix to all manuals.
-#texinfo_appendices = []
+# texinfo_appendices = []
 
 # If false, no module index is generated.
-#texinfo_domain_indices = True
+# texinfo_domain_indices = True
 
 # How to display URL addresses: 'footnote', 'no', or 'inline'.
-#texinfo_show_urls = 'footnote'
+# texinfo_show_urls = 'footnote'
 
 # If true, do not generate a @detailmenu in the "Top" node's menu.
-#texinfo_no_detailmenu = False
+# texinfo_no_detailmenu = False
 
 # Mock the import of the server as otherwise it hangs
 autodoc_mock_imports = ['GangaDirac.Lib.Server.InspectionServer']

ganga/GangaCore/Core/GangaRepository/Registry.py

@@ -241,7 +241,7 @@ def stopped(self):
         """
         Returns if the flusher has stopped as a boolean?
         """
-        return self._stop_event.isSet()
+        return self._stop_event.is_set()
 
     def join(self, *args, **kwargs):
         """

ganga/GangaCore/Core/GangaThread/GangaThreadPool.py

@@ -38,7 +38,7 @@ def __init__(self):
         self.__threads = []
 
     def addServiceThread(self, t):
-        #logger.debug('service thread "%s" added to the GangaThreadPool', t.getName())
+        #logger.debug('service thread "%s" added to the GangaThreadPool', t.name)
         # HERE TO AVOID AN IMPORT ERROR!
         from GangaCore.Core.GangaThread.MTRunner import DuplicateDataItemError
         try:
@@ -47,7 +47,7 @@ def addServiceThread(self, t):
             self.logger.debug("%s" % e)
 
     def delServiceThread(self, t):
-        #logger.debug('service thread "%s" deleted from the GangaThreadPool', t.getName())
+        #logger.debug('service thread "%s" deleted from the GangaThreadPool', t.name)
         try:
             if t in self.__threads:
                 self.__threads.remove(t)
@@ -93,7 +93,7 @@ def _really_shutdown(self):
         import threading
         shutdown_thread = threading.Thread(target=self.__do_shutdown__, args=(
             self.__threads,), name='GANGA_Update_Thread_shutdown')
-        shutdown_thread.setDaemon(True)
+        shutdown_thread.daemon = True
         shutdown_thread.start()
 
         t_start = time.time()
@@ -223,17 +223,17 @@ def __do_shutdown__(_all_threads):
         # Shutdown NON critical threads first as these can cause some critical
         # threads to hang
         for t in reversed(nonCritThreads):
-            logger.debug('shutting down Thread: %s' % t.getName())
+            logger.debug('shutting down Thread: %s' % t.name)
             t.stop()
-            logger.debug('shutdown Thread: %s' % t.getName())
+            logger.debug('shutdown Thread: %s' % t.name)
             # t.unregister()
 
         # Shutdown critical threads now assuming that the non-critical ones
         # have disappeared
         for t in reversed(critThreads):
-            logger.debug('shutting down Thread: %s' % t.getName())
+            logger.debug('shutting down Thread: %s' % t.name)
             t.stop()
-            logger.debug('shutdown Thread: %s' % t.getName())
+            logger.debug('shutdown Thread: %s' % t.name)
             # t.unregister()
 
         #    nonCritThreads = []