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Release prep v.0.1.0 (#89)
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* bump versions
* clear changelog
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fellen31 committed Apr 22, 2024
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -15,7 +15,7 @@ Initial release of genomic-medicine-sweden/nallo, created with the [nf-core](htt
- Call SNVs with DeepVariant and merge with GLNexus
- Annotate SNVs with echtvar and VEP
- Call SVs with Sniffles, tandem repeats with TRGT and CNVs with HiFiCNV
- Phase and haplotag reads with whatshap or HiPhase
- Phase variants and haplotag reads with whatshap or HiPhase
- Create methylation pileups with modkit
- Assemble genomes with hifiasm
- Align assemly to reference and call variants with dipcall
1 change: 1 addition & 0 deletions assets/multiqc_config.yml
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report_comment: >
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This report has been generated by the <a href="https://github.com/genomic-medicine-sweden/nallo/releases/tag/0.1.0" target="_blank">genomic-medicine-sweden/nallo</a>
analysis pipeline.
report_section_order:
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