The R code to run the methods is in the folders associated with the corresponding figure (or table). These include the output files generated from the Harvard Odyssey ("general" or "shared" partition) cluster on which the methods were run. All figures were generated on a a macOSX 10.12.6 personal computer.
Some of the methods (R code) will require data and functions given in the folder "Functions."
Folders generally include the output files, the R code to run the methods and the R code to take the output files (results) and generate the figure. However, simulation output files (results) necessary for making figures are in the "Simulations" folder. Almost all files will require changing the working directories both for the actual methods code and for generating figures. The working directories of the data, functions and the output (results) will have to be changed depending on where the files are saved.
Table 2 is included in the Figure 5 folder.
A link to a repository (OSF) to download the full dataset from the neuroscience (FSCV) application is in the "Data" folder.
Please contact the author at gloewinger@gmail.com with any questions.