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feat: removed pkg_resources from all test files and moved importlib i…
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…nto pandas extra (#1726)

* feat: Introduce compatibility with native namespace packages

* Update copyright year

* removed pkg_resources from all test files and moved importlib into pandas extra

* feat: removed pkg_resources from all test files and moved importlib into pandas extra

* Adding no cover tag to test code

* reformatted with black

* undo revert

* perf: use the first page a results when `query(api_method="QUERY")` (#1723)

* perf: use the first page a results when `query(api_method="QUERY")`

* add tests

* respect max_results with cached page

* respect page_size, also avoid bqstorage if almost fully downloaded

* skip true test if bqstorage not installed

* coverage

* fix: ensure query job retry has longer deadline than API request deadline (#1734)

In cases where we can't disambiguate API failure from job failure,
this ensures we can still retry the job at least once.

* fix: `load_table_from_dataframe` now assumes there may be local null values (#1735)

Even if the remote schema is REQUIRED

Thank you for opening a Pull Request! Before submitting your PR, there are a few things you can do to make sure it goes smoothly:
- [ ] Make sure to open an issue as a [bug/issue](https://github.com/googleapis/python-bigquery/issues/new/choose) before writing your code!  That way we can discuss the change, evaluate designs, and agree on the general idea
- [ ] Ensure the tests and linter pass
- [ ] Code coverage does not decrease (if any source code was changed)
- [ ] Appropriate docs were updated (if necessary)

Fixes #1692 🦕

* chore: standardize samples directory - delete unneeded dependencies (#1732)

* chore: standardize samples directory = delete unneeded dependencies

* Removed unused import for linter

* fix: move grpc, proto-plus and protobuf packages to extras (#1721)

* chore: move grpc, proto-plus and protobuff packages to extras

* formatted with black

* feat: add `job_timeout_ms` to job configuration classes (#1675)

* fix: adds new property and tests

* 🦉 Updates from OwlBot post-processor

See https://github.com/googleapis/repo-automation-bots/blob/main/packages/owl-bot/README.md

* updates docs to correct a sphinx failure

* Updates formatting

* Update tests/system/test_query.py

* 🦉 Updates from OwlBot post-processor

See https://github.com/googleapis/repo-automation-bots/blob/main/packages/owl-bot/README.md

* Update google/cloud/bigquery/job/base.py

* updates one test and uses int_or_none

* Update tests/system/test_query.py

testing something.

* Update tests/system/test_query.py

* testing coverage feature

* 🦉 Updates from OwlBot post-processor

See https://github.com/googleapis/repo-automation-bots/blob/main/packages/owl-bot/README.md

* minor edits

* tweaks to noxfile for testing purposes

* add new test to base as experiment

* adds a test, updates import statements

* add another test

* edit to tests

* formatting fixes

* update noxfile to correct debug code

* removes unneeded comments.

---------

Co-authored-by: Owl Bot <gcf-owl-bot[bot]@users.noreply.github.com>

---------

Co-authored-by: Chalmer Lowe <chalmerlowe@google.com>
Co-authored-by: Owl Bot <gcf-owl-bot[bot]@users.noreply.github.com>
Co-authored-by: Tim Swast <swast@google.com>

* remove unnecessary version checks

* undo bad commit, remove unneeded version checks

* Revert "undo bad commit, remove unneeded version checks"

This reverts commit 5c82dcf.

* Revert "remove unnecessary version checks"

This reverts commit 9331a7e.

* revert bad changes, remove pkg_resources from file

* after clarification, reimplement changes and ignore 3.12 tests

* reformatted with black

* removed minimum check

* updated pandas installed version check

---------

Co-authored-by: Anthonios Partheniou <partheniou@google.com>
Co-authored-by: Tim Swast <swast@google.com>
Co-authored-by: Chalmer Lowe <chalmerlowe@google.com>
Co-authored-by: Owl Bot <gcf-owl-bot[bot]@users.noreply.github.com>
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5 people authored Nov 28, 2023
1 parent 5ce4d13 commit 1f4ebb1
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Showing 12 changed files with 96 additions and 133 deletions.
5 changes: 0 additions & 5 deletions .coveragerc
Original file line number Diff line number Diff line change
Expand Up @@ -12,8 +12,3 @@ exclude_lines =
pragma: NO COVER
# Ignore debug-only repr
def __repr__
# Ignore pkg_resources exceptions.
# This is added at the module level as a safeguard for if someone
# generates the code and tries to run it without pip installing. This
# makes it virtually impossible to test properly.
except pkg_resources.DistributionNotFound
24 changes: 0 additions & 24 deletions google/__init__.py

This file was deleted.

24 changes: 0 additions & 24 deletions google/cloud/__init__.py

This file was deleted.

5 changes: 3 additions & 2 deletions noxfile.py
Original file line number Diff line number Diff line change
Expand Up @@ -137,7 +137,7 @@ def mypy(session):
"types-requests",
"types-setuptools",
)
session.run("mypy", "google/cloud", "--show-traceback")
session.run("mypy", "-p", "google", "--show-traceback")


@nox.session(python=DEFAULT_PYTHON_VERSION)
Expand All @@ -149,7 +149,8 @@ def pytype(session):
session.install("attrs==20.3.0")
session.install("-e", ".[all]")
session.install(PYTYPE_VERSION)
session.run("pytype")
# See https://github.com/google/pytype/issues/464
session.run("pytype", "-P", ".", "google/cloud/bigquery")


@nox.session(python=SYSTEM_TEST_PYTHON_VERSIONS)
Expand Down
10 changes: 2 additions & 8 deletions setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -62,6 +62,7 @@
"pandas>=1.1.0",
pyarrow_dependency,
"db-dtypes>=0.3.0,<2.0.0dev",
"importlib_metadata>=1.0.0; python_version<'3.8'",
],
"ipywidgets": [
"ipywidgets>=7.7.0",
Expand Down Expand Up @@ -108,16 +109,10 @@
# benchmarks, etc.
packages = [
package
for package in setuptools.PEP420PackageFinder.find()
for package in setuptools.find_namespace_packages()
if package.startswith("google")
]

# Determine which namespaces are needed.
namespaces = ["google"]
if "google.cloud" in packages:
namespaces.append("google.cloud")


setuptools.setup(
name=name,
version=version,
Expand All @@ -143,7 +138,6 @@
],
platforms="Posix; MacOS X; Windows",
packages=packages,
namespace_packages=namespaces,
install_requires=dependencies,
extras_require=extras,
python_requires=">=3.7",
Expand Down
23 changes: 10 additions & 13 deletions tests/system/test_pandas.py
Original file line number Diff line number Diff line change
Expand Up @@ -23,9 +23,13 @@
import warnings

import google.api_core.retry
import pkg_resources
import pytest

try:
import importlib.metadata as metadata
except ImportError:
import importlib_metadata as metadata

from google.cloud import bigquery

from google.cloud.bigquery import enums
Expand All @@ -42,11 +46,9 @@
)

if pandas is not None:
PANDAS_INSTALLED_VERSION = pkg_resources.get_distribution("pandas").parsed_version
PANDAS_INSTALLED_VERSION = metadata.version("pandas")
else:
PANDAS_INSTALLED_VERSION = pkg_resources.parse_version("0.0.0")

PANDAS_INT64_VERSION = pkg_resources.parse_version("1.0.0")
PANDAS_INSTALLED_VERSION = "0.0.0"


class MissingDataError(Exception):
Expand Down Expand Up @@ -310,10 +312,7 @@ def test_load_table_from_dataframe_w_automatic_schema(bigquery_client, dataset_i
]


@pytest.mark.skipif(
PANDAS_INSTALLED_VERSION < PANDAS_INT64_VERSION,
reason="Only `pandas version >=1.0.0` is supported",
)
@pytest.mark.skipif(pandas is None, reason="Requires `pandas`")
def test_load_table_from_dataframe_w_nullable_int64_datatype(
bigquery_client, dataset_id
):
Expand Down Expand Up @@ -342,7 +341,7 @@ def test_load_table_from_dataframe_w_nullable_int64_datatype(


@pytest.mark.skipif(
PANDAS_INSTALLED_VERSION < PANDAS_INT64_VERSION,
PANDAS_INSTALLED_VERSION[0:2].startswith("0."),
reason="Only `pandas version >=1.0.0` is supported",
)
def test_load_table_from_dataframe_w_nullable_int64_datatype_automatic_schema(
Expand Down Expand Up @@ -1043,9 +1042,7 @@ def test_list_rows_max_results_w_bqstorage(bigquery_client):
assert len(dataframe.index) == 100


@pytest.mark.skipif(
PANDAS_INSTALLED_VERSION >= pkg_resources.parse_version("2.0.0"), reason=""
)
@pytest.mark.skipif(PANDAS_INSTALLED_VERSION[0:2] not in ["0.", "1."], reason="")
@pytest.mark.parametrize(
("max_results",),
(
Expand Down
14 changes: 8 additions & 6 deletions tests/unit/job/test_query_pandas.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,6 @@
import json

import mock
import pkg_resources
import pytest


Expand Down Expand Up @@ -45,14 +44,19 @@
except (ImportError, AttributeError): # pragma: NO COVER
tqdm = None

try:
import importlib.metadata as metadata
except ImportError:
import importlib_metadata as metadata

from ..helpers import make_connection
from .helpers import _make_client
from .helpers import _make_job_resource

if pandas is not None:
PANDAS_INSTALLED_VERSION = pkg_resources.get_distribution("pandas").parsed_version
PANDAS_INSTALLED_VERSION = metadata.version("pandas")
else:
PANDAS_INSTALLED_VERSION = pkg_resources.parse_version("0.0.0")
PANDAS_INSTALLED_VERSION = "0.0.0"

pandas = pytest.importorskip("pandas")

Expand Down Expand Up @@ -656,9 +660,7 @@ def test_to_dataframe_bqstorage_no_pyarrow_compression():
)


@pytest.mark.skipif(
PANDAS_INSTALLED_VERSION >= pkg_resources.parse_version("2.0.0"), reason=""
)
@pytest.mark.skipif(PANDAS_INSTALLED_VERSION[0:2] not in ["0.", "1."], reason="")
@pytest.mark.skipif(pyarrow is None, reason="Requires `pyarrow`")
def test_to_dataframe_column_dtypes():
from google.cloud.bigquery.job import QueryJob as target_class
Expand Down
32 changes: 10 additions & 22 deletions tests/unit/test__pandas_helpers.py
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,11 @@
import operator
import queue
import warnings
import pkg_resources

try:
import importlib.metadata as metadata
except ImportError:
import importlib_metadata as metadata

import mock

Expand Down Expand Up @@ -57,13 +61,10 @@

bigquery_storage = _versions_helpers.BQ_STORAGE_VERSIONS.try_import()

PANDAS_MINIUM_VERSION = pkg_resources.parse_version("1.0.0")

if pandas is not None:
PANDAS_INSTALLED_VERSION = pkg_resources.get_distribution("pandas").parsed_version
PANDAS_INSTALLED_VERSION = metadata.version("pandas")
else:
# Set to less than MIN version.
PANDAS_INSTALLED_VERSION = pkg_resources.parse_version("0.0.0")
PANDAS_INSTALLED_VERSION = "0.0.0"


skip_if_no_bignumeric = pytest.mark.skipif(
Expand Down Expand Up @@ -542,9 +543,7 @@ def test_bq_to_arrow_array_w_nullable_scalars(module_under_test, bq_type, rows):
],
)
@pytest.mark.skipif(pandas is None, reason="Requires `pandas`")
@pytest.mark.skipif(
PANDAS_INSTALLED_VERSION >= pkg_resources.parse_version("2.0.0"), reason=""
)
@pytest.mark.skipif(PANDAS_INSTALLED_VERSION[0:2] not in ["0.", "1."], reason="")
@pytest.mark.skipif(isinstance(pyarrow, mock.Mock), reason="Requires `pyarrow`")
def test_bq_to_arrow_array_w_pandas_timestamp(module_under_test, bq_type, rows):
rows = [pandas.Timestamp(row) for row in rows]
Expand Down Expand Up @@ -806,10 +805,7 @@ def test_list_columns_and_indexes_with_named_index_same_as_column_name(
assert columns_and_indexes == expected


@pytest.mark.skipif(
pandas is None or PANDAS_INSTALLED_VERSION < PANDAS_MINIUM_VERSION,
reason="Requires `pandas version >= 1.0.0` which introduces pandas.NA",
)
@pytest.mark.skipif(pandas is None, reason="Requires `pandas`")
def test_dataframe_to_json_generator(module_under_test):
utcnow = datetime.datetime.utcnow()
df_data = collections.OrderedDict(
Expand Down Expand Up @@ -837,16 +833,8 @@ def test_dataframe_to_json_generator(module_under_test):
assert list(rows) == expected


@pytest.mark.skipif(pandas is None, reason="Requires `pandas`")
def test_dataframe_to_json_generator_repeated_field(module_under_test):
pytest.importorskip(
"pandas",
minversion=str(PANDAS_MINIUM_VERSION),
reason=(
f"Requires `pandas version >= {PANDAS_MINIUM_VERSION}` "
"which introduces pandas.NA"
),
)

df_data = [
collections.OrderedDict(
[("repeated_col", [pandas.NA, 2, None, 4]), ("not_repeated_col", "first")]
Expand Down
23 changes: 9 additions & 14 deletions tests/unit/test_client.py
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,11 @@
import requests
import packaging
import pytest
import pkg_resources

try:
import importlib.metadata as metadata
except ImportError:
import importlib_metadata as metadata

try:
import pandas
Expand Down Expand Up @@ -76,13 +80,10 @@
from test_utils.imports import maybe_fail_import
from tests.unit.helpers import make_connection

PANDAS_MINIUM_VERSION = pkg_resources.parse_version("1.0.0")

if pandas is not None:
PANDAS_INSTALLED_VERSION = pkg_resources.get_distribution("pandas").parsed_version
PANDAS_INSTALLED_VERSION = metadata.version("pandas")
else:
# Set to less than MIN version.
PANDAS_INSTALLED_VERSION = pkg_resources.parse_version("0.0.0")
PANDAS_INSTALLED_VERSION = "0.0.0"


def _make_credentials():
Expand Down Expand Up @@ -8145,10 +8146,7 @@ def test_load_table_from_dataframe_unknown_table(self):
timeout=DEFAULT_TIMEOUT,
)

@unittest.skipIf(
pandas is None or PANDAS_INSTALLED_VERSION < PANDAS_MINIUM_VERSION,
"Only `pandas version >=1.0.0` supported",
)
@unittest.skipIf(pandas is None, "Requires `pandas`")
@unittest.skipIf(pyarrow is None, "Requires `pyarrow`")
def test_load_table_from_dataframe_w_nullable_int64_datatype(self):
from google.cloud.bigquery.client import _DEFAULT_NUM_RETRIES
Expand Down Expand Up @@ -8193,10 +8191,7 @@ def test_load_table_from_dataframe_w_nullable_int64_datatype(self):
SchemaField("x", "INT64", "NULLABLE", None),
)

@unittest.skipIf(
pandas is None or PANDAS_INSTALLED_VERSION < PANDAS_MINIUM_VERSION,
"Only `pandas version >=1.0.0` supported",
)
@unittest.skipIf(pandas is None, "Requires `pandas`")
# @unittest.skipIf(pyarrow is None, "Requires `pyarrow`")
def test_load_table_from_dataframe_w_nullable_int64_datatype_automatic_schema(self):
from google.cloud.bigquery.client import _DEFAULT_NUM_RETRIES
Expand Down
37 changes: 37 additions & 0 deletions tests/unit/test_packaging.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,37 @@
# Copyright 2023 Google LLC
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import os
import subprocess
import sys


def test_namespace_package_compat(tmp_path):
# The ``google`` namespace package should not be masked
# by the presence of ``google-cloud-bigquery``.
google = tmp_path / "google"
google.mkdir()
google.joinpath("othermod.py").write_text("")
env = dict(os.environ, PYTHONPATH=str(tmp_path))
cmd = [sys.executable, "-m", "google.othermod"]
subprocess.check_call(cmd, env=env)

# The ``google.cloud`` namespace package should not be masked
# by the presence of ``google-cloud-bigquery``.
google_cloud = tmp_path / "google" / "cloud"
google_cloud.mkdir()
google_cloud.joinpath("othermod.py").write_text("")
env = dict(os.environ, PYTHONPATH=str(tmp_path))
cmd = [sys.executable, "-m", "google.cloud.othermod"]
subprocess.check_call(cmd, env=env)
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