Merge latest mindlessgen features into gp3_ipea
#84
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* update docs, co-workers, pyproject.toml, remove typos Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * update CHANGELOG, make case more consistent Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * update mindlessgen.toml Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * align defaults Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * update reference default value Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * update tests Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * correct inconsistent boolean Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> --------- Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
…ion (grimme-lab#78) * fix random number generation by incorporating default_rng Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * update CHANGELOG.md Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> --------- Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
* remove deprecated tests Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * remove random numpy seed as it's pointless now Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> --------- Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
* A new function to set a fixed charge value Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * latest changes to the fixed charge method Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Fixed charge and element composition works test have to be added Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * More modular fixed charge routine Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * complete fixed charge routine Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Removed an unnessesary import Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * more convenient function name Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Worked in the suggested changes Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Added a changelog entry Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Changes a bug with an array type Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * removed left over print statements Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Implemented requested changes Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Added a new test to raise a ValueError Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> --------- Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de>
* implement atlist to ati conversion Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> * add conversion test Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de> --------- Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
…b#80) * bug fix were uhf was always 0 if a fixed charge were given Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * updated a test for the right uhf Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * get rid of redundant code within set_random_charge Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * using atlist as a variable in misscellaneous Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> --------- Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de>
Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
grimme-lab#74) * The .UHF file is now written if the molecule has a uhf larger than 0 Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Writes the .CHRG file if the charge is larger than 0 Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * charge and uhf can be None Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> * Negative charge is now written aswell Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de> --------- Signed-off-by: Jonathan Schöps <s6jtscho@uni-bonn.de>
Signed-off-by: Marcel Müller <marcel.mueller@thch.uni-bonn.de>
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