Clinical Bioinformatics @Boehringer-Ingelheim.
@scverse core dev.
Formerly PhD student @icbi-lab.
My private account.
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Boehringer Ingelheim
- Biberach, DE
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02:05
(UTC +02:00) - https://grst.github.io
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scverse/scirpy
scverse/scirpy PublicA scanpy extension to analyse single-cell TCR and BCR data.
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omnideconv/immunedeconv
omnideconv/immunedeconv PublicA unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
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nf-core/scrnaseq
nf-core/scrnaseq PublicA single-cell RNAseq pipeline for 10X genomics data
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rstudio-server-conda
rstudio-server-conda PublicRun Rstudio Server in a conda environment
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icbi-lab/infercnvpy
icbi-lab/infercnvpy PublicInfer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
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containerize-conda
containerize-conda PublicTurn an existing conda environment into a Singularity container
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