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Update filter.sh
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hanjunlee21 authored Apr 14, 2022
1 parent c07701a commit 7027daa
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion PanChIP/filter.sh
Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@ do
(task2 "$file") &
done
wait
echo $inputfiles | sed -e 's/ /.txt '$sedoutput'\//g' -e 's/^/'$sedlib'\/TR.txt '$sedoutput'\//' -e 's/$/.txt/' | xargs paste | awk 'BEGIN{print "'$(sed -e 's/ /\\t/g' -e 's/^/TR\\t/' <<< $inputfiles)'"} {print}' > $output/primary.output.tsv
echo $inputfiles | sed -e 's/ /.txt '$sedoutput'\//g' -e 's/^/'$sedlib'\/Experiment.txt '$sedoutput'\//' -e 's/$/.txt/' | xargs paste | awk 'BEGIN{print "'$(sed -e 's/ /\\t/g' -e 's/^/TR\\t/' <<< $inputfiles)'"} {print}' > $output/primary.output.tsv
for file in $inputfiles
do
rm $output/$file.txt
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